RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FAM169BQ8N8A8 192 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 MYLIPQ8WY64 445 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 IFT43Q96FT9 208 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 RUSC1Q9BVN2 902 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 PCDHB7Q9Y5E2 793 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 TSPAN1O60635 241 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 ZNF623O75123 536 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 PLCG1P19174 1290 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 RAB27AP51159 221 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 CEBPZQ03701 1054 aaKnown RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 RELTQ969Z4 430 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 C5orf67F2Z3F1 127 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 SPTLC2O15270 562 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 TSPAN6O43657 245 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 LPXNO60711 386 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 EOMESO95936 686 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 PLA2G4BP0C869 781 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 ADGRE1Q14246 886 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
TPM3-207ENST00000341372 STK38Q15208 465 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 UBXN11Q5T124 520 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 USP49Q70CQ1 688 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 KCNN1Q92952 543 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 SHDQ96IW2 340 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 CLIC6Q96NY7 704 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 FZD8Q9H461 694 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 C17orf75Q9HAS0 396 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 FAM105AQ9NUU6 356 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
TPM3-207ENST00000341372 ATG2AQ2TAZ0 1938 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 HIP1RO75146 1068 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 ERLIN2O94905 339 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 FOSL2P15408 326 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 BTG3Q14201 252 aaPredicted RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 ZBTB8OSQ8IWT0 167 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 ARNTL2Q8WYA1 636 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 RAD54LQ92698 747 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 PLIN2Q99541 437 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 PRMT7Q9NVM4 692 aaPredicted RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 CNTNAP2Q9UHC6 1331 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 FGFR1P11362 822 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 GATMP50440 423 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 IFRD2Q12894 506 aaPredicted RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 DDR2Q16832 855 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 EPC2Q52LR7 807 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 SYCP2LQ5T4T6 812 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 NOTUMQ6P988 496 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 CCDC81Q6ZN84 652 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
TPM3-207ENST00000341372 TMEM192Q8IY95 271 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 IFT74Q96LB3 600 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 BCO2Q9BYV7 579 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 ARHGAP28Q9P2N2 729 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 ODF2LQ9ULJ1 636 aa11.28□□□□□ -0.6
TPM3-207ENST00000341372 HAX1O00165 279 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 PDPK1O15530 556 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 CUTAO60888 179 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 RB1P06400 928 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 PCSK2P16519 638 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
TPM3-207ENST00000341372 TXLNAP40222 546 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 EFNA5P52803 228 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 CLLU1OSQ5K130 101 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 AXDND1Q5T1B0 1012 aaPredicted RBP11.27□□□□□ -0.61
TPM3-207ENST00000341372 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
TPM3-207ENST00000341372 CASD1Q96PB1 797 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms