RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ART3Q13508 389 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 XKR3Q5GH77 459 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 DCLK2Q8N568 766 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 SPATA4Q8NEY3 305 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 TADA3O75528 432 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 DGAT1O75907 488 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 HSPA4LO95757 839 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 PMLP29590 882 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 WDR24Q96S15 920 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 HSPBP1Q9NZL4 362 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 MAP3K7O43318 606 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 TCF7P36402 384 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 EPHB1P54762 984 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 E4F1Q66K89 784 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 ZNF746Q6NUN9 644 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 EHD4Q9H223 541 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 KPNA7A9QM74 516 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 AOC2O75106 756 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 MX2P20592 715 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 GCKP35557 465 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 RECQLP46063 649 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 TMPRSS15P98073 1019 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 MTF1Q14872 753 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 GSPT2Q8IYD1 628 aaKnown RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■■□□□ 13.8
DNMT1-201ENST00000340748 GUCY2CP25092 1073 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 ROR1Q01973 937 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 PDZD8Q8NEN9 1154 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 COG1Q8WTW3 980 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 REEP2Q9BRK0 252 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 DRC3Q9H069 523 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 UBN1Q9NPG3 1134 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 RGL1Q9NZL6 768 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 UVRAGQ9P2Y5 699 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 PACSIN2Q9UNF0 486 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 NFKBIAP25963 317 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 NNMTP40261 264 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 NDUFAF2Q8N183 169 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 SCG3Q8WXD2 468 aaKnown RBP13.59□□□□□ -0.23
DNMT1-201ENST00000340748 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
DNMT1-201ENST00000340748 CHGBP05060 677 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 EFCAB12Q6NXP0 572 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 TLK2Q86UE8 772 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 TTC17Q96AE7 1141 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 ACAP3Q96P50 834 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.23
DNMT1-201ENST00000340748 MYMKA6NI61 221 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 SKIP12755 728 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 CASP2P42575 452 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FLT3LGP49771 235 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 HEY1Q9Y5J3 304 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 SPECC1L-ADORA2AF8WAN1 911 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ASAP2O43150 1006 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FSCBQ5H9T9 825 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 XRRA1Q6P2D8 792 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 CNPY4Q8N129 248 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 TRIM62Q9BVG3 475 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 VIPAS39Q9H9C1 493 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 PRKCBP05771 671 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 FMO5P49326 533 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ATP11CQ8NB49 1132 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ZNF560Q96MR9 790 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 TRAIPQ9BWF2 469 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 TRIM15Q9C019 465 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ABHD16BQ9H3Z7 469 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.58□□□□□ -0.24
DNMT1-201ENST00000340748 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
DNMT1-201ENST00000340748 LRG1P02750 347 aa13.57□□□□□ -0.24
DNMT1-201ENST00000340748 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
DNMT1-201ENST00000340748 MYBP10242 640 aa13.57□□□□□ -0.24
DNMT1-201ENST00000340748 GPS1Q13098 491 aa13.57□□□□□ -0.24
DNMT1-201ENST00000340748 MXD4Q14582 209 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-201ENST00000340748 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
DNMT1-201ENST00000340748 HEATR6Q6AI08 1181 aaKnown RBP13.57□□□□□ -0.24
DNMT1-201ENST00000340748 ITPRIPL1Q6GPH6 555 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms