RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ROR1Q01973 937 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 ITKQ08881 620 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 EFHD1Q9BUP0 239 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 DDX56Q9NY93 547 aaKnown RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 AIPL1Q9NZN9 384 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 STRIP2Q9ULQ0 834 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 NPEPPSP55786 919 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 STX1BP61266 288 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 IFI35P80217 286 aaPredicted RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 OVGP1Q12889 678 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 RABGAP1LQ5R372 815 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 ZKSCAN4Q969J2 545 aaPredicted RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 PHTF1Q9UMS5 762 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 CPA2P48052 419 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 PTENP60484 403 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 KRT76Q01546 638 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GABPAQ06546 454 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 NFIXQ14938 502 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 ATP8B4Q8TF62 1192 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 NLRP4Q96MN2 994 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 NUDT12Q9BQG2 462 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GOLGA8QA0A0J9YX86 632 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GOLGA8OA6NCC3 632 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GOLGA8NF8WBI6 632 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 MRPS35P82673 323 aaKnown RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GIT2Q14161 759 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 IL17AQ16552 155 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 MIIPQ5JXC2 388 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 CNKSR1Q969H4 720 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 UBTFL6P0CB48 400 aaPredicted RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 GHRP10912 638 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 KCTD19Q17RG1 926 aaPredicted RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 C1orf228Q6PIY5 440 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 POLR3FQ9H1D9 316 aaPredicted RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 KIF9Q9HAQ2 790 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 IL17RBQ9NRM6 502 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 ASNSD1Q9NWL6 643 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 SLC26A4O43511 780 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 SGPL1O95470 568 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
RRP1B-201ENST00000340648 HIC1Q14526 733 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 FSCBQ5H9T9 825 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 RCOR2Q8IZ40 523 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 ACAP3Q96P50 834 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 OLFM3Q96PB7 478 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 PI4K2AQ9BTU6 479 aa15.68■□□□□ 0.1
RRP1B-201ENST00000340648 KLRC4O43908 158 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 EIF3EP60228 445 aaKnown RBP15.67■□□□□ 0.1
RRP1B-201ENST00000340648 ITPK1Q13572 414 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 ARHGAP18Q8N392 663 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 RPF1Q9H9Y2 349 aaKnown RBP15.67■□□□□ 0.1
RRP1B-201ENST00000340648 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 A0A0A6YYK5 440 aaPredicted RBP15.67■□□□□ 0.1
RRP1B-201ENST00000340648 PRPSAP1Q14558 356 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 ICA1LQ8NDH6 482 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 GLIS3Q8NEA6 775 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 SLC20A1Q8WUM9 679 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 BLOC1S4Q9NUP1 217 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
RRP1B-201ENST00000340648 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 THTPAQ9BU02 230 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
RRP1B-201ENST00000340648 CHMP2BQ9UQN3 213 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 B2RBV5 119 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 SURF1Q15526 300 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 DCAF15Q66K64 600 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 BTNL9Q6UXG8 535 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 AGR3Q8TD06 166 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 GTF3C4Q9UKN8 822 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 TRAF3IP3Q9Y228 551 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 AGLP35573 1532 aa15.67■□□□□ 0.1
RRP1B-201ENST00000340648 ASAP2O43150 1006 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 C3orf62Q6ZUJ4 267 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 LDHDQ86WU2 507 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
RRP1B-201ENST00000340648 JCADQ9P266 1359 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 MSH4O15457 936 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 APBA3O96018 575 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 SERPINB4P48594 390 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 ACOT2P49753 483 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 CUL3Q13618 768 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 NAIF1Q69YI7 327 aaPredicted RBP15.66■□□□□ 0.1
RRP1B-201ENST00000340648 ZBTB10Q96DT7 871 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 MAGEB18Q96M61 343 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 MCEEQ96PE7 176 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 DONSONQ9NYP3 566 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 NPR1P16066 1061 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 PAX7P23759 505 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 CDH6P55285 790 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 ANO5Q75V66 913 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 PRPF38AQ8NAV1 312 aaKnown RBP15.66■□□□□ 0.1
RRP1B-201ENST00000340648 FEM1BQ9UK73 627 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms