RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CCDC94Q9BW85 323 aaPredicted RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 TRIM6Q9C030 488 aaPredicted RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 C11orf49Q9H6J7 331 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 RAB20Q9NX57 234 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
TMC1-202ENST00000340019 LUC7L2Q9Y383 392 aaKnown RBP8.47□□□□□ -1.05
TMC1-202ENST00000340019 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.05
TMC1-202ENST00000340019 MGEA5O60502 916 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 TPM1P09493 284 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 TLE2Q04725 743 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 DUOXA2Q1HG44 320 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 XKR4Q5GH76 650 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 TWF2Q6IBS0 349 aaKnown RBP8.46□□□□□ -1.05
TMC1-202ENST00000340019 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 CD302Q8IX05 232 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 FAM212AQ96EL1 285 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 SNX27Q96L92 541 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 TMEM106CQ9BVX2 250 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 MTMR12Q9C0I1 747 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 CXCL16Q9H2A7 254 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 FAM105AQ9NUU6 356 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 AJAP1Q9UKB5 411 aaPredicted RBP8.46□□□□□ -1.05
TMC1-202ENST00000340019 C2CD2Q9Y426 696 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 PCDHB2Q9Y5E7 798 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.46□□□□□ -1.05
TMC1-202ENST00000340019 SCN5AQ14524 2016 aa8.46□□□□□ -1.05
TMC1-202ENST00000340019 RECQL4O94761 1208 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 NFICP08651 508 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 HNRNPH3P31942 346 aaKnown RBP8.46□□□□□ -1.06
TMC1-202ENST00000340019 POLR2FP61218 127 aaKnown RBP8.46□□□□□ -1.06
TMC1-202ENST00000340019 SCARA3Q6AZY7 606 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 JADE1Q6IE81 842 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 TRAPPC11Q7Z392 1133 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 NT5DC4Q86YG4 428 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 CXorf38Q8TB03 319 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.46□□□□□ -1.06
TMC1-202ENST00000340019 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 DAAM1Q9Y4D1 1078 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 FHOD1Q9Y613 1164 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 TET1Q8NFU7 2136 aa8.46□□□□□ -1.06
TMC1-202ENST00000340019 UMODL1Q5DID0 1318 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 NBNO60934 754 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZNF623O75123 536 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZSCAN20P17040 1043 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 AKAP5P24588 427 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 JAM2P57087 298 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZBTB6Q15916 424 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 IQCEQ6IPM2 695 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 GJB7Q6PEY0 223 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 UBE2Q1Q7Z7E8 422 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 MRPL10Q7Z7H8 261 aaKnown RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 OR8K1Q8NGG5 319 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZMAT2Q96NC0 199 aaKnown RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 IFIH1Q9BYX4 1025 aaKnown RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 TBX21Q9UL17 535 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 PLAGL2Q9UPG8 496 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 DERAQ9Y315 318 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZC3H11AO75152 810 aaKnown RBP eCLIP8.45□□□□□ -1.06
TMC1-202ENST00000340019 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 HLA-DRAP01903 254 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 RFX1P22670 979 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 YARSP54577 528 aaKnown RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 TFAMQ00059 246 aaKnown RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 MEA1Q16626 185 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 LRRC26Q2I0M4 334 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 WDR59Q6PJI9 974 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 CCDC112Q8NEF3 446 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 ZNF397Q8NF99 534 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 GPR88Q9GZN0 384 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 WNT8AQ9H1J5 351 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 NLRC4Q9NPP4 1024 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 MYO6Q9UM54 1294 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 A0A0U1RQF3 1178 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 LRRC53A6NM62 1247 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 RAB27AP51159 221 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 BIRC3Q13489 604 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 NCOA4Q13772 614 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 TMEM132DQ14C87 1099 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 PLEKHG4Q58EX7 1191 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 E4F1Q66K89 784 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 PDXDC1Q6P996 788 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 FAM43BQ6ZT52 329 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 RRAGAQ7L523 313 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 CACNA2D4Q7Z3S7 1137 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 NECAB2Q7Z6G3 386 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 RTN4RL1Q86UN2 441 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 ARHGEF19Q8IW93 802 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 C1orf127Q8N9H9 656 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 SYN2Q92777 582 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 ANKRD36BP1Q96IX9 119 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 TSPAN18Q96SJ8 248 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 BAG1Q99933 345 aaPredicted RBP8.45□□□□□ -1.06
TMC1-202ENST00000340019 HIPK3Q9H422 1215 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 RGS18Q9NS28 235 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 DNAJC12Q9UKB3 198 aa8.45□□□□□ -1.06
TMC1-202ENST00000340019 TMEM191BP0C7N4 346 aa8.44□□□□□ -1.06
TMC1-202ENST00000340019 KCNE1P15382 129 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms