RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RINLQ6ZS11 566 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF513Q8N8E2 541 aaPredicted RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 SLC44A5Q8NCS7 719 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF398Q8TD17 642 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 COA7Q96BR5 231 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 RBM17Q96I25 401 aaKnown RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 AGPAT1Q99943 283 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 SEPT11Q9NVA2 429 aaKnown RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 DDX25Q9UHL0 483 aaKnown RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 PCDHB13Q9Y5F0 798 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 UMODL1Q5DID0 1318 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 KDM3AQ9Y4C1 1321 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 CLIC2O15247 247 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 GYG2O15488 501 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 FAM200BP0CF97 657 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 GPC5P78333 572 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 PTK6Q13882 451 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 UBE4AQ14139 1066 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 LLGL1Q15334 1064 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TRIP13Q15645 432 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 VPS72Q15906 364 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CAVIN4Q5BKX8 364 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 FAM182BQ5T319 152 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ACBD5Q5T8D3 534 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 DAB2IPQ5VWQ8 1189 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 SFR1Q86XK3 245 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 RELL1Q8IUW5 271 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 SLC20A1Q8WUM9 679 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF75CPQ92670 426 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 NSL1Q96IY1 281 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 C9orf72Q96LT7 481 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CCDC77Q9BR77 488 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 NPHS2Q9NP85 383 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TYW1Q9NV66 732 aaKnown RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ETNK2Q9NVF9 386 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TAS2R1Q9NYW7 299 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ANAPC5Q9UJX4 755 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 GMEB1Q9Y692 573 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 FOXN3O00409 490 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 SORBS3O60504 671 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 MTA2O94776 668 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CAMTA2O94983 1202 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 PABPC4LP0CB38 370 aaKnown RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 DLATP10515 647 aaKnown RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 RPL13P26373 211 aaKnown RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 ADCY7P51828 1080 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 BPIFB4P59827 614 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CAV1Q03135 178 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 KCNA1Q09470 495 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 BMT2Q1RMZ1 405 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 RIBC1Q8N443 379 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-201ENST00000339754 RFWD2Q8NHY2 731 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CENPKQ9BS16 269 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TUBB6Q9BUF5 446 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TRAIPQ9BWF2 469 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 TRABDQ9H4I3 376 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 RIOX1Q9H6W3 641 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 KIAA1586Q9HCI6 787 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CHST7Q9NS84 486 aa9.99□□□□□ -0.81
NECAP1-201ENST00000339754 CFAP69A5D8W1 941 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 CLDN3O15551 220 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 TGFB1I1O43294 461 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 MED24O75448 989 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 ASLP04424 464 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 AMPD1P23109 780 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 PRDX5P30044 214 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 RFC4P35249 363 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 FMO5P49326 533 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 NR1H3Q13133 447 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 THOC5Q13769 683 aaKnown RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 PKN2Q16513 984 aaKnown RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 MAPK6Q16659 721 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 FBXO33Q7Z6M2 555 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 PSPC1Q8WXF1 523 aaKnown RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 STMN2Q93045 179 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 HIC2Q96JB3 615 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 IL1RAPL1Q9NZN1 696 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 NEU2Q9Y3R4 380 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 ZMYM2Q9UBW7 1377 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 A6NJR5 290 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 A8MXQ7 604 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 TYROBPO43914 113 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 RNASEH1O60930 286 aaKnown RBP9.98□□□□□ -0.81
NECAP1-201ENST00000339754 TNNI2P48788 182 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 PSMC6P62333 389 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 CBWD6Q4V339 395 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 SGO2Q562F6 1265 aa9.98□□□□□ -0.81
NECAP1-201ENST00000339754 CBWD3Q5JTY5 395 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms