RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IFNL1Q8IU54 200 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 ZNF564Q8TBZ8 553 aaPredicted RBP17.49■□□□□ 0.39
LITAF-201ENST00000339430 ZIC5Q96T25 663 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 TMEM8AQ9HCN3 771 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 ARID2Q68CP9 1835 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 TCRBV7S2A1N4TA0A589 114 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 MIF4GDA9UHW6 222 aaKnown RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 HNRNPDLO14979 420 aaKnown RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 SPOPO43791 374 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 PYGMP11217 842 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 KRT5P13647 590 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 EDNRBP24530 442 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 MDH1P40925 334 aaKnown RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 PDE6CP51160 858 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 PLTPP55058 493 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 PRELID2Q8N945 189 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 FBXL13Q8NEE6 735 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 BICD1Q96G01 975 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 CDHR1Q96JP9 859 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 RAB20Q9NX57 234 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 DCDC2CA8MYV0 355 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 KCNA2P16389 499 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 PEX5P50542 639 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 INHBEP58166 350 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 ODF2Q5BJF6 829 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 LMBRD2Q68DH5 695 aaPredicted RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 SV2AQ7L0J3 742 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 MAGOHBQ96A72 148 aaKnown RBP17.48■□□□□ 0.39
LITAF-201ENST00000339430 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 TSPYL1Q9H0U9 437 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 FAM169AQ9Y6X4 670 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 IVNS1ABPQ9Y6Y0 642 aa17.48■□□□□ 0.39
LITAF-201ENST00000339430 PHF2O75151 1096 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 GZMAP12544 262 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 ADORA2AP29274 412 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 GPC3P51654 580 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 CYP24A1Q07973 514 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 KRT71Q3SY84 523 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 SEL1L2Q5TEA6 688 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 TTC27Q6P3X3 843 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 PHLDB2Q86SQ0 1253 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 C1orf131Q8NDD1 294 aaKnown RBP17.47■□□□□ 0.39
LITAF-201ENST00000339430 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 FAM107BQ9H098 131 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 ZDHHC18Q9NUE0 388 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 NOVA2Q9UNW9 492 aaKnown RBP17.47■□□□□ 0.39
LITAF-201ENST00000339430 A6NNZ2 444 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 PMM2O15305 246 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 TMOD1P28289 359 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 SP2Q02086 613 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 IFFO1Q0D2I5 559 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
LITAF-201ENST00000339430 PTGISQ16647 500 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 TUBB8Q3ZCM7 444 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 RUFY4Q6ZNE9 571 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 GPR142Q7Z601 462 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 CCDC60Q8IWA6 550 aaPredicted RBP17.47■□□□□ 0.39
LITAF-201ENST00000339430 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 EPN3Q9H201 632 aa17.47■□□□□ 0.39
LITAF-201ENST00000339430 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
LITAF-201ENST00000339430 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
LITAF-201ENST00000339430 PTGIRP43119 386 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 CDR2Q01850 454 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 DHX34Q14147 1143 aaKnown RBP17.46■□□□□ 0.39
LITAF-201ENST00000339430 EMC10Q5UCC4 262 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 FBXO25Q8TCJ0 367 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 RPS6KC1Q96S38 1066 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
LITAF-201ENST00000339430 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 COQ4Q9Y3A0 265 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 ADGRA2Q96PE1 1338 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 PLXNB2O15031 1838 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 FAM187AA6NFU0 413 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 KIAA0391O15091 583 aaKnown RBP17.46■□□□□ 0.39
LITAF-201ENST00000339430 STRNO43815 780 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 STBD1O95210 358 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 MAGEA9P43362 315 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 TCEAL1Q15170 157 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 PPP2R5EQ16537 467 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
LITAF-201ENST00000339430 CYFIP1Q7L576 1253 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 CD101Q93033 1021 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 XPNPEP1Q9NQW7 623 aa17.46■□□□□ 0.39
LITAF-201ENST00000339430 E7EVH7 732 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 SHBGP04278 402 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 ICAM3P32942 547 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 MTERF2Q49AM1 385 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 ZDHHC24Q6UX98 284 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 TAS1R3Q7RTX0 852 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 GPD1LQ8N335 351 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms