RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C12orf50Q8NA57 414 aaPredicted RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 SLCO2A1Q92959 643 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 KATNBL1Q9H079 304 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 PCYOX1Q9UHG3 505 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 ARHGEF35A5YM69 484 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 SOWAHBA6NEL2 793 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ZSCAN5CA6NGD5 496 aaPredicted RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 MOXD2PA6NHM9 499 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 PODXLO00592 558 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 TRIM66O15016 1216 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 MEFVO15553 781 aaPredicted RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 BUB1BO60566 1050 aaPredicted RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 PHF2O75151 1096 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 KRT14P02533 472 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 CLTBP09497 229 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ALAS1P13196 640 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ITGB8P26012 769 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 CTNNA2P26232 953 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 NMT1P30419 496 aaKnown RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 GTF2H1P32780 548 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 USP8P40818 1118 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 GTF2BQ00403 316 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 CYP4A11Q02928 519 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ZNF844Q08AG5 666 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 CTTNQ14247 550 aaKnown RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 HLTFQ14527 1009 aaKnown RBP eCLIP11.58□□□□□ -0.56
RTN3-201ENST00000338850 SHHQ15465 462 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 KCNA10Q16322 511 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 USH1GQ495M9 461 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 C9orf50Q5SZB4 431 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 CEP85LQ5SZL2 805 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 NAA35Q5VZE5 725 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 DUPD1Q68J44 220 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 KLHL7Q8IXQ5 586 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 UBL4BQ8N7F7 174 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 SLC35G2Q8TBE7 412 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 TLCD1Q96CP7 247 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 RNPC3Q96LT9 517 aaKnown RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ACCSQ96QU6 501 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 WNT8AQ9H1J5 351 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 STARD7Q9NQZ5 370 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
RTN3-201ENST00000338850 COQ4Q9Y3A0 265 aa11.58□□□□□ -0.56
RTN3-201ENST00000338850 ESYT3A0FGR9 886 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 TMCO5BA8MYB1 307 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 KIAA0355O15063 1070 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 CLIC2O15247 247 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 PQBP1O60828 265 aaKnown RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 RTN2O75298 545 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ICAM1P05362 532 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 NCKAP1LP55160 1127 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 GJA9P57773 515 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 ODR4Q5SWX8 454 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 FAM109BQ6ICB4 259 aaPredicted RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 XRRA1Q6P2D8 792 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 DAW1Q8N136 415 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ATP8B4Q8TF62 1192 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 DHX38Q92620 1227 aaKnown RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 PGM2Q96G03 612 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 TOX2Q96NM4 488 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 FMO2Q99518 471 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ERP44Q9BS26 406 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 LXNQ9BS40 222 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ZNF577Q9BSK1 485 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 DDX47Q9H0S4 455 aaKnown RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 UNC45AQ9H3U1 944 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ACTR5Q9H9F9 607 aaPredicted RBP11.57□□□□□ -0.56
RTN3-201ENST00000338850 C17orf75Q9HAS0 396 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ZDHHC18Q9NUE0 388 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 UVRAGQ9P2Y5 699 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 UBIAD1Q9Y5Z9 338 aa11.57□□□□□ -0.56
RTN3-201ENST00000338850 ASB14A6NK59 587 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 EXOC3O60645 756 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 HIP1RO75146 1068 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 ZC3H11AO75152 810 aaKnown RBP eCLIP11.56□□□□□ -0.56
RTN3-201ENST00000338850 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 C6orf222P0C671 652 aaPredicted RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 PLS3P13797 630 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 HOXA13P31271 388 aaPredicted RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 FNTAP49354 379 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 NKX3-2P78367 333 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms