RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 SGPL1O95470 568 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 CYP2C19P33261 490 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 TNFSF9P41273 254 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 CUL2Q13617 745 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 SGSM1Q2NKQ1 1148 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 PPP1R2P3Q6NXS1 205 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
HPS1-202ENST00000338546 OR5B17Q8NGF7 314 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 TPCN2Q8NHX9 752 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 KAT2BQ92831 832 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 OSBPL9Q96SU4 736 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 RPF1Q9H9Y2 349 aaKnown RBP17.47■□□□□ 0.39
HPS1-202ENST00000338546 ARGLU1Q9NWB6 273 aaPredicted RBP17.47■□□□□ 0.39
HPS1-202ENST00000338546 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.47■□□□□ 0.39
HPS1-202ENST00000338546 PCDHB2Q9Y5E7 798 aa17.47■□□□□ 0.39
HPS1-202ENST00000338546 V9GYY5 206 aaPredicted RBP17.47■□□□□ 0.39
HPS1-202ENST00000338546 B4GALT5O43286 388 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 ASS1P00966 412 aaKnown RBP17.46■□□□□ 0.39
HPS1-202ENST00000338546 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 AKR1A1P14550 325 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 CHRNB2P17787 502 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 NOP2P46087 812 aaKnown RBP17.46■□□□□ 0.39
HPS1-202ENST00000338546 MFSD10Q14728 455 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 CCL14Q16627 93 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 EEF1DP3Q658K8 133 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 LMBRD2Q68DH5 695 aaPredicted RBP17.46■□□□□ 0.39
HPS1-202ENST00000338546 PDCL2Q8N4E4 241 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 LRRC57Q8N9N7 239 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 SLC20A1Q8WUM9 679 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 NLRP7Q8WX94 980 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 PI4K2AQ9BTU6 479 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 ASB7Q9H672 318 aa17.46■□□□□ 0.39
HPS1-202ENST00000338546 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
HPS1-202ENST00000338546 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
HPS1-202ENST00000338546 MGAMO43451 1857 aa17.46■□□□□ 0.38
HPS1-202ENST00000338546 A0A1B0GUA9 196 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 TNNC2P02585 160 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 VTNP04004 478 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 H2AFXP16104 143 aaPredicted RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 ACO1P21399 889 aaKnown RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 PSEN2P49810 448 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 NOP14P78316 857 aaKnown RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 FMO1Q01740 532 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 SLC47A2Q86VL8 602 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 NT5DC4Q86YG4 428 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 CD302Q8IX05 232 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 DDX1Q92499 740 aaKnown RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 ZBTB10Q96DT7 871 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 ANKRD36BP1Q96IX9 119 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 GCOM2Q9BZD3 368 aaPredicted RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 ADAMTS10Q9H324 1103 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 PDZD7Q9H5P4 517 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 SEPT11Q9NVA2 429 aaKnown RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 TULP1O00294 542 aaPredicted RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 MTA2O94776 668 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 ERLIN2O94905 339 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
HPS1-202ENST00000338546 GNAT1P11488 350 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 KRT5P13647 590 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 GPC5P78333 572 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 NKX3-2P78367 333 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 ADAM17P78536 824 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 DCAF4L1Q3SXM0 396 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 TEX35Q5T0J7 233 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 TRIM72Q6ZMU5 477 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 THNSL1Q8IYQ7 743 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 ADPGKQ9BRR6 497 aa17.45■□□□□ 0.38
HPS1-202ENST00000338546 GPR25O00155 361 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 KIF3CO14782 793 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 TSPAN1O60635 241 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 TMEM191BP0C7N4 346 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 ARF4P18085 180 aaPredicted RBP17.44■□□□□ 0.38
HPS1-202ENST00000338546 PAFAH1B1P43034 410 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 NOGQ13253 232 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 TRPC3Q13507 836 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 RPS6KA1Q15418 735 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 NME8Q8N427 588 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 MSANTD4Q8NCY6 345 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 SLC35G2Q8TBE7 412 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 PBKQ96KB5 322 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
HPS1-202ENST00000338546 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
HPS1-202ENST00000338546 APOBEC3GQ9HC16 384 aaKnown RBP17.44■□□□□ 0.38
HPS1-202ENST00000338546 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
HPS1-202ENST00000338546 AXLP30530 894 aa17.43■□□□□ 0.38
HPS1-202ENST00000338546 HOXC8P31273 242 aa17.43■□□□□ 0.38
HPS1-202ENST00000338546 YWHAEP62258 255 aaKnown RBP17.43■□□□□ 0.38
HPS1-202ENST00000338546 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
HPS1-202ENST00000338546 FSCN1Q16658 493 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms