RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SPATA16Q9BXB7 569 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 AGO2Q9UKV8 859 aaKnown RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 PPIEQ9UNP9 301 aaKnown RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ZBTB5O15062 677 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 TBC1D12O60347 775 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 RARS2Q5T160 578 aaKnown RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ATPAF2Q8N5M1 289 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 GPR63Q9BZJ6 419 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 MKL2Q9ULH7 1088 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ASAP2O43150 1006 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 PRCPP42785 496 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 ACTR2P61160 394 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 ARHGEF38Q9NXL2 777 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 SLC30A1Q9Y6M5 507 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 SKAP2O75563 359 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 CIAO1O76071 339 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 TBXAS1P24557 533 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 S100A5P33763 92 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 ACOT2P49753 483 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 IZUMO3Q5VZ72 239 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 FOXP4Q8IVH2 680 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 PTPRN2Q92932 1015 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 DEPDC7Q96QD5 511 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 FAM118BQ9BPY3 351 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 DDX47Q9H0S4 455 aaKnown RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 C2orf40Q9H1Z8 148 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 PCDHB7Q9Y5E2 793 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 HDDC2Q7Z4H3 204 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 ARHGEF3Q9NR81 526 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 N6AMT1Q9Y5N5 214 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 EMSYQ7Z589 1322 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 WEE1P30291 646 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 CDKL3Q8IVW4 592 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 CEP95Q96GE4 821 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 MAGED4Q96JG8 741 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
SHANK2-201ENST00000338508 RNPEPQ9H4A4 650 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 A0A1W2PQ27 194 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 A0A1W2PQ64 194 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 A0A1W2PQD8 194 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 TMEM143Q96AN5 459 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
SHANK2-201ENST00000338508 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 INTS2Q9H0H0 1204 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 PARVAQ9NVD7 372 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 AGAP1Q9UPQ3 857 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 NFIBO00712 420 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 TXNP10599 105 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 CYP2B6P20813 491 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 TSC22D1Q15714 1073 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 C16orf62Q7Z3J2 963 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 OOSP2Q86WS3 158 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 ADGRF4Q8IZF3 695 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 SNF8Q96H20 258 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 RNF14Q9UBS8 474 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 NLRP9Q7RTR0 991 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 ENDOD1O94919 500 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 USP10Q14694 798 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 GUCA1AP43080 201 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 UNC13DQ70J99 1090 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 RAD54LQ92698 747 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 FAM136AQ96C01 138 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 SHCBP1LQ9BZQ2 653 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 FAM129AQ9BZQ8 928 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 AIM2O14862 343 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 CYP26A1O43174 497 aa12.37□□□□□ -0.43
SHANK2-201ENST00000338508 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-201ENST00000338508 TSC22D2O75157 780 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms