RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ACKR2O00590 384 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TLR2O60603 784 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 MTMR8Q96EF0 704 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DDX27Q96GQ7 796 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TMEM169Q96HH4 297 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT12Q99456 494 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TMEM39AQ9NV64 488 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 FAM237AA0A1B0GTK4 181 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 GTPBP10A4D1E9 387 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ADORA2BP29275 332 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 NAA35Q5VZE5 725 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF564Q8TBZ8 553 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 SH3TC2Q8TF17 1288 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 C18orf8Q96DM3 657 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 TRPV6Q9H1D0 765 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 TNRC6CQ9HCJ0 1690 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ITGB3P05106 788 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 GFPT1Q06210 699 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 CDO1Q16878 200 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 SLC27A1Q6PCB7 646 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 GSDMBQ8TAX9 411 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ITGA11Q9UKX5 1188 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 KIAA1257Q9ULG3 409 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 LRRD1A4D1F6 860 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ITGB5P18084 799 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 UAP1Q16222 522 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 TTI2Q6NXR4 508 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 CYP26A1O43174 497 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 EVI5O60447 810 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ICAM3P32942 547 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 TRAPPC11Q7Z392 1133 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT222Q8N1A0 295 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ATP2A3Q93084 1043 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PTPROQ16827 1216 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 RBBP8NLQ8NC74 664 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 RFFLQ8WZ73 363 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 C11orf70Q9BRQ4 267 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 WNT8AQ9H1J5 351 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PDE11AQ9HCR9 933 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PYCARDQ9ULZ3 195 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 TLDC2A0PJX2 215 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ZRANB2O95218 330 aaKnown RBP eCLIP9.91□□□□□ -0.827e-6■■■■■ 37.3
FNDC3B-201ENST00000336824 ALDH3A1P30838 453 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 GNL1P36915 607 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 ATN1P54259 1190 aaPredicted RBP9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 COG7P83436 770 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 CDK17Q00537 523 aa9.91□□□□□ -0.82
FNDC3B-201ENST00000336824 POLR3GO15318 223 aaPredicted RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 STAMBPO95630 424 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 TFDP2Q14188 446 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 SLC18A3Q16572 532 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 EFCAB13Q8IY85 973 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 DHX38Q92620 1227 aaKnown RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 CPB2Q96IY4 423 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 YME1L1Q96TA2 773 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 BTBD7Q9P203 1132 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 FARP2O94887 1054 aaPredicted RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 C1orf186Q6ZWK4 172 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 MYRIPQ8NFW9 859 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 APOEP02649 317 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 RTP1P59025 263 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 BEX3Q00994 111 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 BRD3Q15059 726 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 HYIQ5T013 277 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 BTBD8Q5XKL5 378 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 CCNYQ8ND76 341 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 SLC1A1P43005 524 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 E2F4Q16254 413 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 HSPH1Q92598 858 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 MAML3Q96JK9 1138 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 MRPL9Q9BYD2 267 aaKnown RBP9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 ASB7Q9H672 318 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 HPCAL4Q9UM19 191 aa9.9□□□□□ -0.82
FNDC3B-201ENST00000336824 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 DPYSL4O14531 572 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 PRRG1O14668 218 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 DUSP11O75319 330 aaKnown RBP9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 LYPLA2O95372 231 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 SMIM10L2AP0DMW4 78 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 SMIM10L2BP0DMW5 78 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 CUL2Q13617 745 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 STKLD1Q8NE28 680 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 IL31RAQ8NI17 732 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms