RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ANKRD62A6NC57 917 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 STAM2O75886 525 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 CXCL8P10145 99 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 RRM1P23921 792 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 KCNJ1P48048 391 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 CDH8P55286 799 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 FBXL18Q96ME1 805 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-201ENST00000336180 NEUROG2Q9H2A3 272 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 CNOT8Q9UFF9 292 aaKnown RBP13.5□□□□□ -0.25
LIMK1-201ENST00000336180 HPCAL4Q9UM19 191 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 PTPN22Q9Y2R2 807 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 IGKV6D-21A0A0A0MT36 114 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 SART1O43290 800 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ADCY6O43306 1168 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 MAFO75444 373 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 C4BPAP04003 597 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 FLT3P36888 993 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 LMAN1P49257 510 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 GPC3P51654 580 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 NCOA4Q13772 614 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 MYBPC2Q14324 1141 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ZNF568Q3ZCX4 644 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ZNF564Q8TBZ8 553 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 PTPN18Q99952 460 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 A0A0B4J269 797 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 GARTP22102 1010 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 GPC5P78333 572 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 SNX1Q13596 522 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 UHMK1Q8TAS1 419 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 RNPC3Q96LT9 517 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 NIFKQ9BYG3 293 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 IVNS1ABPQ9Y6Y0 642 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 EVPLQ92817 2033 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 PGRMC1O00264 195 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
LIMK1-201ENST00000336180 DAPK3O43293 454 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 THAP12O43422 761 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 MSCO60682 206 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 SLC25A27O95847 323 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 CCDC172P0C7W6 258 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 PRLRP16471 622 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ZACNQ401N2 412 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ZFYVE27Q5T4F4 411 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 CCDC62Q6P9F0 684 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
LIMK1-201ENST00000336180 MKI67P46013 3256 aaKnown RBP13.48□□□□□ -0.25
LIMK1-201ENST00000336180 MAPK6Q16659 721 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 IFI16Q16666 785 aaKnown RBP13.48□□□□□ -0.25
LIMK1-201ENST00000336180 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 C17orf75Q9HAS0 396 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 KRT14P02533 472 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 PSMC4P43686 418 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 TTLL4Q14679 1199 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 PSMD6Q15008 389 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
LIMK1-201ENST00000336180 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
LIMK1-201ENST00000336180 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 TJP2Q9UDY2 1190 aa13.48□□□□□ -0.25
LIMK1-201ENST00000336180 LGALS2P05162 132 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 PYGMP11217 842 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 TMOD1P28289 359 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 CDR2Q01850 454 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 HSP90B2PQ58FF3 399 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 EFCAB13Q8IY85 973 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■□□□ 14.2
LIMK1-201ENST00000336180 APOL6Q9BWW8 343 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 HES2Q9Y543 173 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 CNTNAP2Q9UHC6 1331 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 RNF40O75150 1001 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 RTN2O75298 545 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 VPS41P49754 854 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 KIZQ2M2Z5 673 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 HES6Q96HZ4 224 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 AGPSO00116 658 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 GPR25O00155 361 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 SYF2O95926 243 aaKnown RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 TCF4P15884 667 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms