RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 HNRNPDLO14979 420 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 RARGP13631 454 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CROCCP2Q86T23 111 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 PASD1Q8IV76 773 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CDAN1Q8IWY9 1227 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 PGM2Q96G03 612 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 PAGR1Q9BTK6 254 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CDC42EP4Q9H3Q1 356 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 GGA2Q9UJY4 613 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 GAS8O95995 478 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 ADRB2P07550 413 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 TNNI1P19237 187 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 SEMA4DQ92854 862 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 PWWP2AQ96N64 755 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 RIT2Q99578 217 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 FGFR1OP2Q9NVK5 253 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CHCHD3Q9NX63 227 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 HERC5Q9UII4 1024 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 EXOC7Q9UPT5 735 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 STK38LQ9Y2H1 464 aa17.61■□□□□ 0.41
CDC42EP4-201ENST00000335793 CNGA1P29973 690 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 DMP1Q13316 513 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PDCD2Q16342 344 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PLEKHO2Q8TD55 490 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 SYT11Q9BT88 431 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 ZNF341Q9BYN7 854 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 TRIM7Q9C029 511 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 CTNNAL1Q9UBT7 734 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 USP20Q9Y2K6 914 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PDHA1P08559 390 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 ATF2P15336 505 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 STX2P32856 288 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 POLE2P56282 527 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 NFIL3Q16649 462 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 HP1BP3Q5SSJ5 553 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 KAZNQ674X7 775 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 LLGL2Q6P1M3 1020 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 SLC9A9Q8IVB4 645 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 ZNF570Q96NI8 536 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 IWS1Q96ST2 819 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 EPB41L4BQ9H329 900 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PCYOX1Q9UHG3 505 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 TMEM120BA0PK00 339 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 CREB1P16220 341 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 CHRNB2P17787 502 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 MMP13P45452 471 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 DRG2P55039 364 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 FMO1Q01740 532 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 C1QTNF12Q5T7M4 302 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 DRAXINQ8NBI3 349 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PRCCQ92733 491 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 VTI1AQ96AJ9 217 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
CDC42EP4-201ENST00000335793 PEX5P50542 639 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 FNBP1Q96RU3 617 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 ADAM33Q9BZ11 813 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 C15orf41Q9Y2V0 281 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 RTN3O95197 1032 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 GGPS1O95749 300 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 GZMAP12544 262 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 ELF3P78545 371 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 SEPT14Q6ZU15 432 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 TRPM8Q7Z2W7 1104 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 USP37Q86T82 979 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 SRRM1Q8IYB3 904 aaKnown RBP17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 OLIG1Q8TAK6 271 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 CEP170P1Q96L14 293 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 C9orf72Q96LT7 481 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 GTF3C4Q9UKN8 822 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 PAEPP09466 180 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 BRAFP15056 766 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 MAB21L3Q8N8X9 362 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 CCT6BQ92526 530 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 PCDHA3Q9Y5H8 950 aa17.59■□□□□ 0.41
CDC42EP4-201ENST00000335793 ARFGEF1Q9Y6D6 1849 aa17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 SMNDC1O75940 238 aaKnown RBP eCLIP17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 CTNNA2P26232 953 aa17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 NSFP46459 744 aaKnown RBP17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 PLCB3Q01970 1234 aa17.58■□□□□ 0.41
CDC42EP4-201ENST00000335793 ALCAMQ13740 583 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms