RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HOXA2O43364 376 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 B4GALT3O60512 393 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 ATP1A3P13637 1013 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 ATP2A2P16615 1042 aaKnown RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 CCDC40Q4G0X9 1142 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 NOMO2Q5JPE7 1267 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 LMBRD2Q68DH5 695 aaPredicted RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 SCARA3Q6AZY7 606 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 FAM109BQ6ICB4 259 aaPredicted RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 GLB1LQ6UWU2 654 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 OR5B17Q8NGF7 314 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 SLC35C1Q96A29 364 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 CGRRF1Q99675 332 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 MTIF3Q9H2K0 278 aaKnown RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 BECN2A8MW95 431 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 KCNJ18B7U540 433 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 POMCP01189 267 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 TRIM49P0CI25 452 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 TRIM49CP0CI26 452 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 SOX4Q06945 474 aaPredicted RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 KCNJ12Q14500 433 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 SURF1Q15526 300 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 TCP11X2Q5H9J9 407 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 APTXQ7Z2E3 356 aaKnown RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 RNF214Q8ND24 703 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 C18orf25Q96B23 403 aaPredicted RBP18.97■□□□□ 0.63
CHGA-202ENST00000334654 TSPAN18Q96SJ8 248 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 TBC1D13Q9NVG8 400 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 INTS13Q9NVM9 706 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 DERAQ9Y315 318 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 C2CD2Q9Y426 696 aa18.97■□□□□ 0.63
CHGA-202ENST00000334654 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 TBKBP1A7MCY6 615 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 DDHD2O94830 711 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 THP07101 528 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 DLATP10515 647 aaKnown RBP18.96■□□□□ 0.63
CHGA-202ENST00000334654 KRT13P13646 458 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 EEF1GP26641 437 aaKnown RBP18.96■□□□□ 0.63
CHGA-202ENST00000334654 PPP3CAQ08209 521 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 ZNF280BQ86YH2 543 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 WDR49Q8IV35 697 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 FAM114A1Q8IWE2 563 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 CXorf38Q8TB03 319 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 KIF12Q96FN5 646 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 RPS6KC1Q96S38 1066 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 HCSTQ9UBK5 93 aa18.96■□□□□ 0.63
CHGA-202ENST00000334654 GRXCR1A8MXD5 290 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 DSC1Q08554 894 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 GRIK3Q13003 919 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 TMEM132DQ14C87 1099 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 KRT31Q15323 416 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 MIIPQ5JXC2 388 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 C15orf39Q6ZRI6 1047 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 NT5DC4Q86YG4 428 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 RSPH1Q8WYR4 309 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 FNBP1Q96RU3 617 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 KANSL3Q9P2N6 904 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 TUBGCP4Q9UGJ1 667 aa18.95■□□□□ 0.62
CHGA-202ENST00000334654 LIMA1Q9UHB6 759 aaKnown RBP18.95■□□□□ 0.62
CHGA-202ENST00000334654 SCN1AP35498 2009 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 C4BPAP04003 597 aaKnown RBP18.94■□□□□ 0.62
CHGA-202ENST00000334654 LINC00271P0C7V0 271 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 TNNI1P19237 187 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 GUCY2FP51841 1108 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 PAN2Q504Q3 1202 aaKnown RBP18.94■□□□□ 0.62
CHGA-202ENST00000334654 CHRDL2Q6WN34 429 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 CMTR2Q8IYT2 770 aaKnown RBP18.94■□□□□ 0.62
CHGA-202ENST00000334654 ABI1Q8IZP0 508 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 SP7Q8TDD2 431 aaPredicted RBP18.94■□□□□ 0.62
CHGA-202ENST00000334654 RAD9AQ99638 391 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 TUBGCP2Q9BSJ2 902 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 CWH43Q9H720 699 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 NRDE2Q9H7Z3 1164 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 GOLGA2P5Q9HBQ8 144 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 CACNG4Q9UBN1 327 aa18.94■□□□□ 0.62
CHGA-202ENST00000334654 KIAA1671Q9BY89 1806 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 CYP3A5P20815 502 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 MTIF2P46199 727 aaKnown RBP18.93■□□□□ 0.62
CHGA-202ENST00000334654 RABGGTBP53611 331 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 TFAMQ00059 246 aaKnown RBP18.93■□□□□ 0.62
CHGA-202ENST00000334654 KCNH2Q12809 1159 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 DUOXA2Q1HG44 320 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 SV2AQ7L0J3 742 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 CREBRFQ8IUR6 639 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 COLGALT2Q8IYK4 626 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 TDHQ8IZJ6 230 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 C1orf127Q8N9H9 656 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 URGCPQ8TCY9 931 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 MTMR12Q9C0I1 747 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 MAGEC2Q9UBF1 373 aaPredicted RBP18.93■□□□□ 0.62
CHGA-202ENST00000334654 DNAJB4Q9UDY4 337 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 SIX4Q9UIU6 781 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 UBQLN1Q9UMX0 589 aaKnown RBP18.93■□□□□ 0.62
CHGA-202ENST00000334654 INSL6Q9Y581 213 aa18.93■□□□□ 0.62
CHGA-202ENST00000334654 LCHNA4D1U4 455 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 IGFBP6P24592 240 aaPredicted RBP18.92■□□□□ 0.62
CHGA-202ENST00000334654 GCLMP48507 274 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 TUSC3Q13454 348 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 ZACNQ401N2 412 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms