RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TAF1BQ53T94 588 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CEP97Q8IW35 865 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 METTL13Q8N6R0 699 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 SNX25Q9H3E2 840 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDZK1P1A8MUH7 402 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PFDN6O15212 129 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 GFPT2O94808 682 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ACSL1P33121 698 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF852Q6ZMS4 543 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNG4Q8TDN1 519 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MIEF2Q96C03 454 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 NOX5Q96PH1 765 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TUT1Q9H6E5 874 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDZRN3Q9UPQ7 1066 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 KPNA7A9QM74 516 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM228BP0C875 321 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF445P59923 1031 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PABPC4Q13310 644 aaKnown RBP eCLIP6.37□□□□□ -1.392e-8■□□□□ 11
CDC42BPA-201ENST00000334218 POSTNQ15063 836 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MZT2BQ6NZ67 158 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANKRD13DQ6ZTN6 518 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 C12orf66Q96MD2 445 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PICK1Q9NRD5 415 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 UFSP2Q9NUQ7 469 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 GUCA1CO95843 209 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP6V1B1P15313 513 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 WARSP23381 471 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MORF4L2Q15014 288 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ADCK5Q3MIX3 580 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 OSBP2Q969R2 916 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CENPTQ96BT3 561 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MRPL48Q96GC5 212 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 EFCAB1Q9HAE3 211 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MTMR10Q9NXD2 777 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 YEATS2Q9ULM3 1422 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ITSN2Q9NZM3 1697 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSMD3O43242 534 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPKAPK2P49137 400 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CLCN2P51788 898 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 EIF5AP63241 154 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARID5AQ03989 594 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 EFTUD2Q15029 972 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 SCN4BQ8IWT1 228 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 UBE2J2Q8N2K1 259 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 JMJD4Q9H9V9 463 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ABCB9Q9NP78 766 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 NFKBIL1Q9UBC1 381 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TSPYL4Q9UJ04 414 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 NPR3P17342 541 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CSTF3Q12996 717 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 RASA3Q14644 834 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPANXN2Q5MJ10 180 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 RSBN1Q5VWQ0 802 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMEM154Q6P9G4 183 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 STRA8Q7Z7C7 330 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 RAD51AP1Q96B01 352 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 NDUFAF4Q9P032 175 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCDHGA6Q9Y5G7 932 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MYH3P11055 1940 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRKD3O94806 890 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CORO7P57737 925 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ETF1P62495 437 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZC3H12BQ5HYM0 836 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIM50Q86XT4 487 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 GIMAP8Q8ND71 665 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM216AQ8WUB2 273 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 VHLP40337 213 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCT8P50990 548 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TOP3AQ13472 1001 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 RASSF3Q86WH2 238 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF451Q9Y4E5 1061 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 DTNAQ9Y4J8 743 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZFYVE16Q7Z3T8 1539 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 DISP1Q96F81 1524 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 GRID2IPA4D2P6 1211 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZBTB5O15062 677 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 FOXO3O43524 673 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 TADA2AO75478 443 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 DMC1Q14565 340 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RTN1Q16799 776 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPDYE1Q8NFV5 336 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 OTUB1Q96FW1 271 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGAP28Q9P2N2 729 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 POLG2Q9UHN1 485 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CTTNBP2Q8WZ74 1663 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDLIM1O00151 329 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MEN1O00255 615 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CD4P01730 458 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 GCLCP48506 637 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPS7P62081 194 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ACTN3Q08043 901 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 DNAL1Q4LDG9 190 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 EZH1Q92800 747 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 IPO11Q9UI26 975 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms