RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ASB2Q96Q27 587 aa15.26■□□□□ 0.03
LIMS1-201ENST00000332345 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
LIMS1-201ENST00000332345 MRPL17Q9NRX2 175 aaKnown RBP15.26■□□□□ 0.03
LIMS1-201ENST00000332345 EXOC1Q9NV70 894 aa15.26■□□□□ 0.03
LIMS1-201ENST00000332345 MARCH5Q9NX47 278 aa15.26■□□□□ 0.03
LIMS1-201ENST00000332345 CPSF3Q9UKF6 684 aaKnown RBP15.26■□□□□ 0.03
LIMS1-201ENST00000332345 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.035e-6■■■■■ 116.1
LIMS1-201ENST00000332345 XIRP2A4UGR9 3374 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-201ENST00000332345 LACTBL1A8MY62 500 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
LIMS1-201ENST00000332345 FAM189A1O60320 539 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 B3GAT3O94766 335 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 ADRB2P07550 413 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 SRGAP2BP0DMP2 458 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 KCNA5P22460 613 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 ADSSP30520 456 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 GTF2F1P35269 517 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS1-201ENST00000332345 TNFSF9P41273 254 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 ACOT2P49753 483 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 EHHADHQ08426 723 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 ELAVL2Q12926 359 aaKnown RBP15.25■□□□□ 0.03
LIMS1-201ENST00000332345 DUSP6Q16828 381 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 USP41Q3LFD5 358 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 FUT10Q6P4F1 479 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 EPM2AIP1Q7L775 607 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-201ENST00000332345 FAM212AQ96EL1 285 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 PAAF1Q9BRP4 392 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 VN1R3Q9BXE9 311 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 EMILIN2Q9BXX0 1053 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 FGFBP2Q9BYJ0 223 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 SLC39A2Q9NP94 309 aa15.25■□□□□ 0.03
LIMS1-201ENST00000332345 UBE4BO95155 1302 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 TISP43B9A030 160 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 TMEM189-UBE2V1I3L0A0 370 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 KIAA0391O15091 583 aaKnown RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 KLRC4O43908 158 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 EFEMP2O95967 443 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 URODP06132 367 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 NDUFV1P49821 464 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 CLCNKBP51801 687 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 SNRPFP62306 86 aaKnown RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 TFF2Q03403 129 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 UPP1Q16831 310 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 PUS10Q3MIT2 529 aaKnown RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 KMT5BQ4FZB7 885 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 ZBTB41Q5SVQ8 909 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 ARMCX5Q6P1M9 558 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 TAS1R1Q7RTX1 841 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 GPR65Q8IYL9 337 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 FMR1NBQ8N0W7 255 aaPredicted RBP15.24■□□□□ 0.03
LIMS1-201ENST00000332345 AUTS2Q8WXX7 1259 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 GPR62Q9BZJ7 368 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 IKZF4Q9H2S9 585 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 ASB7Q9H672 318 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 CHST7Q9NS84 486 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 CACNG4Q9UBN1 327 aa15.24■□□□□ 0.03
LIMS1-201ENST00000332345 F8W810 466 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 KIF4AO95239 1232 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 CYP3A5P20815 502 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 KLRC2P26717 231 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 GLUD2P49448 558 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 DSG1Q02413 1049 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 LEXMQ3ZCV2 418 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 KIAA0319Q5VV43 1072 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 HS2ST1Q7LGA3 356 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 GLIS3Q8NEA6 775 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 C18orf25Q96B23 403 aaPredicted RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 FAM213AQ9BRX8 229 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 GOLGA2P5Q9HBQ8 144 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 CGNQ9P2M7 1197 aaKnown RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
LIMS1-201ENST00000332345 DERAQ9Y315 318 aa15.23■□□□□ 0.03
LIMS1-201ENST00000332345 A0A0C4DFX4 3053 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 PODXLO00592 558 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 C2CD2LO14523 706 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 LINC01565O15544 149 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 EXTL3O43909 919 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 LILRB3O75022 631 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
LIMS1-201ENST00000332345 KIF20AO95235 890 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 IL18RAPO95256 599 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 HOXD13P35453 343 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 LTBRP36941 435 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 CREMQ03060 361 aa15.22■□□□□ 0.03
LIMS1-201ENST00000332345 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
LIMS1-201ENST00000332345 SPAG1Q07617 926 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms