RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 TIFAQ96CG3 184 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 MKNK1Q9BUB5 465 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 PDE11AQ9HCR9 933 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 C2CD2Q9Y426 696 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 TMEM265A0A087WTH1 108 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 SYCE3A1L190 88 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 LAG3P18627 525 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 ERVK-21P61565 698 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
LRRC28-202ENST00000331450 SPAG1Q07617 926 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 PPP2R2DQ66LE6 453 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 NT5DC4Q86YG4 428 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 COLGALT1Q8NBJ5 622 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 RDH13Q8NBN7 331 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 BORCS6Q96GS4 357 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 CEP63Q96MT8 703 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 TMEM175Q9BSA9 504 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 C17orf80Q9BSJ5 609 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 SLC28A3Q9HAS3 691 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 FRMD4BQ9Y2L6 1034 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 TSC2P49815 1807 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 PTPRJQ12913 1337 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
LRRC28-202ENST00000331450 C5orf67F2Z3F1 127 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 CETN3O15182 167 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 SLC16A3O15427 465 aaKnown RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 SLC11A1P49279 550 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 BCAR1P56945 870 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 ENPEPQ07075 957 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 TMEM132DQ14C87 1099 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 SURF1Q15526 300 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 SPATA1Q5VX52 437 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 FAM186BQ8IYM0 893 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 CSGALNACT2Q8N6G5 542 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 C18orf25Q96B23 403 aaPredicted RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 FAM212AQ96EL1 285 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 KIF12Q96FN5 646 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 LRCH3Q96II8 777 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 SAMD11Q96NU1 681 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 TGS1Q96RS0 853 aaKnown RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 TUBGCP4Q9UGJ1 667 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 UBQLN1Q9UMX0 589 aaKnown RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 RWDD3Q9Y3V2 267 aa17.4■□□□□ 0.38
LRRC28-202ENST00000331450 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.4■□□□□ 0.38
LRRC28-202ENST00000331450 VWA8A3KMH1 1905 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 SCN1AP35498 2009 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 GALTP07902 379 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CYP3A5P20815 502 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 BMPR1AP36894 532 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 PBX3P40426 434 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CLDN10P78369 228 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 KCNT2Q6UVM3 1135 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 TMC2Q8TDI7 906 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 PARD3BQ8TEW8 1205 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 ZNF558Q96NG5 402 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CGRRF1Q99675 332 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 PAAF1Q9BRP4 392 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.37
LRRC28-202ENST00000331450 CHD7Q9P2D1 2997 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 CARNS1A5YM72 827 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 CASTOR2A6NHX0 329 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 NRP1O14786 923 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 XPOTO43592 962 aaKnown RBP17.38■□□□□ 0.37
LRRC28-202ENST00000331450 LRPAP1P30533 357 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 CTNNB1P35222 781 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 MARSP56192 900 aaKnown RBP17.38■□□□□ 0.37
LRRC28-202ENST00000331450 BFSP1Q12934 665 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 C1orf220Q5T0J3 134 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
LRRC28-202ENST00000331450 FILIP1Q7Z7B0 1213 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
LRRC28-202ENST00000331450 SLC39A11Q8N1S5 342 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 TMEM130Q8N3G9 435 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 UROC1Q96N76 676 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 PLVAPQ9BX97 442 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 AAASQ9NRG9 546 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 INTS13Q9NVM9 706 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 MARCH5Q9NX47 278 aa17.38■□□□□ 0.37
LRRC28-202ENST00000331450 LRRIQ3A6PVS8 624 aaPredicted RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 TMEM189-UBE2V1I3L0A0 370 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 EFEMP2O95967 443 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 EPB41P11171 864 aaKnown RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 DLG4P78352 724 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 UPP1Q16831 310 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 SPOUT1Q5T280 376 aaKnown RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 GPR153Q6NV75 609 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms