RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 PCDHB13Q9Y5F0 798 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 RNASEH1O60930 286 aaKnown RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 RPA3P35244 121 aaPredicted RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 SPARCL1Q14515 664 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 SIX1Q15475 284 aaPredicted RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 CLUL1Q15846 466 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 P3H1Q32P28 736 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 CYP4F22Q6NT55 531 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 RHBDF2Q6PJF5 856 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 LARSQ9P2J5 1176 aaKnown RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 ATP8B3O60423 1300 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 WDR91A4D1P6 747 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 ATMINO43313 823 aaPredicted RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 MARCH6O60337 910 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 OR6B1O95007 311 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 ARHGAP44Q17R89 818 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 EDRF1Q3B7T1 1238 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 SLC45A4Q5BKX6 768 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 MARK2Q7KZI7 788 aaKnown RBP19.38■□□□□ 0.69
SOCS3-201ENST00000330871 ATG4AQ8WYN0 398 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 SLC35C1Q96A29 364 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 CYTH2Q99418 400 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 LGALS13Q9UHV8 139 aa19.38■□□□□ 0.69
SOCS3-201ENST00000330871 IRS2Q9Y4H2 1338 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 TNNI2P48788 182 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 SLC1A5Q15758 541 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 TBC1D9BQ66K14 1250 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 ZC3H3Q8IXZ2 948 aaKnown RBP19.37■□□□□ 0.69
SOCS3-201ENST00000330871 RFWD2Q8NHY2 731 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 NAT14Q8WUY8 206 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 MPP4Q96JB8 637 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 IKZF4Q9H2S9 585 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 CLIC5Q9NZA1 410 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 ZNF212Q9UDV6 495 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 DNAJC12Q9UKB3 198 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 OPHN1O60890 802 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 LRRN2O75325 713 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 ASLP04424 464 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 PLA2G4BP0C869 781 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 TTLL12Q14166 644 aaPredicted RBP19.37■□□□□ 0.69
SOCS3-201ENST00000330871 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 HAS1Q92839 578 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 ABTB1Q969K4 478 aaPredicted RBP19.37■□□□□ 0.69
SOCS3-201ENST00000330871 AGBL1Q96MI9 1066 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 NYXQ9GZU5 481 aa19.37■□□□□ 0.69
SOCS3-201ENST00000330871 DDX25Q9UHL0 483 aaKnown RBP19.37■□□□□ 0.69
SOCS3-201ENST00000330871 UMODL1Q5DID0 1318 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 KDM3AQ9Y4C1 1321 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 A0A0G2JND7 137 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 POTEB3A0JP26 581 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 ANKRD62A6NC57 917 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 POTECB2RU33 542 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 CLDN3O15551 220 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 ITGA2BP08514 1039 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 GRIK5Q16478 980 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 HYIQ5T013 277 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 POTEBQ6S5H4 581 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 CDCA7Q9BWT1 371 aaPredicted RBP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 BCAS3Q9H6U6 928 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 WHRNQ9P202 907 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 GSTTP1A0A1W2PQM5 241 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 MIF4GDA9UHW6 222 aaKnown RBP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 USP1O94782 785 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 VAV1P15498 845 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 HOXD13P35453 343 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 GRIA2P42262 883 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 CPA2P48052 419 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 PDK4Q16654 411 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 CYP1B1Q16678 543 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 ZNF746Q6NUN9 644 aaPredicted RBP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 DENND1AQ8TEH3 1009 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 SLC20A1Q8WUM9 679 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 DDX27Q96GQ7 796 aaKnown RBP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 IWS1Q96ST2 819 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 SAR1AQ9NR31 198 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 DDX43Q9NXZ2 648 aaKnown RBP19.36■□□□□ 0.69
SOCS3-201ENST00000330871 KANSL3Q9P2N6 904 aa19.36■□□□□ 0.69
SOCS3-201ENST00000330871 POTEFA5A3E0 1075 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 POC1B-GALNT4F8VUJ3 575 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 C2CD2LO14523 706 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 HAUS5O94927 633 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 BAG2O95816 211 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 POTEIP0CG38 1075 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 POTEJP0CG39 1038 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 CA4P22748 312 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 SERPINB3P29508 390 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 NOVP48745 357 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 DSG1Q02413 1049 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 LMNB2Q03252 620 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 Q4G0T1 1027 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 POTEEQ6S8J3 1075 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 SATL1Q86VE3 508 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 SNRNP27Q8WVK2 155 aaKnown RBP19.35■□□□□ 0.69
SOCS3-201ENST00000330871 MAML1Q92585 1016 aa19.35■□□□□ 0.69
SOCS3-201ENST00000330871 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
SOCS3-201ENST00000330871 TTC1Q99614 292 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms