RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CBFA2T3O75081 653 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 RARBP10826 455 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PLCG2P16885 1265 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 MAGEA10P43363 369 aaPredicted RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 SESN3P58005 492 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PDE1BQ01064 536 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PRPF4BQ13523 1007 aaKnown RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 GRM4Q14833 912 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 EPHA7Q15375 998 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 DNAL1Q4LDG9 190 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 SLC44A4Q53GD3 710 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 KYAT3Q6YP21 454 aaKnown RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 CCDC110Q8TBZ0 833 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 DNAJC19Q96DA6 116 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 CCDC97Q96F63 343 aaPredicted RBP8.91□□□□□ -0.98
SKA2-201ENST00000330137 MPP4Q96JB8 637 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PNMA5Q96PV4 448 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 PLIN2Q99541 437 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 C1orf21Q9H246 121 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.91□□□□□ -0.98
SKA2-201ENST00000330137 PCDHA2Q9Y5H9 948 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 KDM3AQ9Y4C1 1321 aa8.91□□□□□ -0.98
SKA2-201ENST00000330137 MAGEB6P1A0A0J9YX57 407 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 RASA4BC9J798 803 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 RASA4O43374 803 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 THAP12O43422 761 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 CIB2O75838 187 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
SKA2-201ENST00000330137 UBTFL6P0CB48 400 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 UQCRBP14927 111 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CREB1P16220 341 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 SERPINB3P29508 390 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 TXKP42681 527 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 OXCT1P55809 520 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ACTR3P61158 418 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 BTG3Q14201 252 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 PDCD4Q53EL6 469 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 ZC2HC1CQ53FD0 456 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 KRT79Q5XKE5 535 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CC2D2BQ6DHV5 1058 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 TTC27Q6P3X3 843 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 RFWD3Q6PCD5 774 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 IZUMO2Q6UXV1 221 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 OTUD6AQ7L8S5 288 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 PDSS2Q86YH6 399 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 MAP7D3Q8IWC1 876 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 KBTBD2Q8IY47 623 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 U2AF1L4Q8WU68 220 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 STK33Q9BYT3 514 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ETNK2Q9NVF9 386 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ABCF2Q9UG63 623 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ZNHIT2Q9UHR6 403 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 PADI4Q9UM07 663 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 DMTF1Q9Y222 760 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 A0A1W2PRG0 241 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 ZNF862O60290 1169 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 SOX5P35711 763 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CTSWP56202 376 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CABP4P57796 275 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CREB5Q02930 508 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 DNAJC3Q13217 504 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 NFIL3Q16649 462 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
SKA2-201ENST00000330137 ANKS1BQ7Z6G8 1248 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 SLC13A5Q86YT5 568 aaPredicted RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 SRRM1Q8IYB3 904 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 ALLCQ8N6M5 410 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 PDCD7Q8N8D1 485 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 DDI1Q8WTU0 396 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 SCFD1Q8WVM8 642 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CFAP57Q96MR6 1250 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 NAP1L4Q99733 375 aaKnown RBP8.9□□□□□ -0.98
SKA2-201ENST00000330137 C6orf50Q9HD87 102 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 CHMP2BQ9UQN3 213 aa8.9□□□□□ -0.98
SKA2-201ENST00000330137 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 MINDY4BA8MYZ0 360 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 TP73O15350 636 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 ZCCHC18P0CG32 403 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 XRCC5P13010 732 aaKnown RBP8.9□□□□□ -0.99
SKA2-201ENST00000330137 TECP42680 631 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 CDC16Q13042 620 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 SBK1Q52WX2 424 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 C1orf228Q6PIY5 440 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 FAM47EQ6ZV65 393 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 FNDC8Q8TC99 324 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 TRPC4APQ8TEL6 797 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 ALG3Q92685 438 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 HPS3Q969F9 1004 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 SKA1Q96BD8 255 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 ALKBH8Q96BT7 664 aaKnown RBP8.9□□□□□ -0.99
SKA2-201ENST00000330137 AGBL1Q96MI9 1066 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 PRICKLE1Q96MT3 831 aaPredicted RBP8.9□□□□□ -0.99
SKA2-201ENST00000330137 OXCT2Q9BYC2 517 aaPredicted RBP8.9□□□□□ -0.99
SKA2-201ENST00000330137 TRIM55Q9BYV6 548 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 VPS11Q9H270 941 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms