RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DPP7Q9UHL4 492 aa4.43□□□□□ -1.7
CBX3P1-201ENST00000325243 KCNE5Q9UJ90 142 aa4.43□□□□□ -1.7
CBX3P1-201ENST00000325243 PROP1O75360 226 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 ZFPL1O95159 310 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 GPANK1O95872 356 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 SREBF1P36956 1147 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 CDK17Q00537 523 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 SP140Q13342 867 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 FSCN1Q16658 493 aaKnown RBP4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 UGT8Q16880 541 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 CCDC144BQ3MJ40 725 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 C16orf86Q6ZW13 317 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 HOMER1Q86YM7 354 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 FAM43AQ8N2R8 423 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 GPR156Q8NFN8 814 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 TSPEARQ8WU66 669 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 PTCD3Q96EY7 689 aaKnown RBP4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 SLC29A3Q9BZD2 475 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 KCTD5Q9NXV2 234 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 SLC17A6Q9P2U8 582 aa4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 ARPP21Q9UBL0 812 aaPredicted RBP4.42□□□□□ -1.7
CBX3P1-201ENST00000325243 WIPF3A6NGB9 483 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 RAP2AP10114 183 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 ECHS1P30084 290 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 ALDH1A3P47895 512 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 VAV2P52735 878 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 CCT2P78371 535 aaKnown RBP4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 UBXN2BQ14CS0 331 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 ZNF788Q6ZQV5 615 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 AHI1Q8N157 1196 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 STON2Q8WXE9 905 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 C1QTNF7Q9BXJ2 289 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 PIF1Q9H611 641 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 FANCLQ9NW38 375 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 FBXO34Q9NWN3 711 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
CBX3P1-201ENST00000325243 POMCP01189 267 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 ATP5JP18859 108 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 FPR1P21462 350 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 ENPP1P22413 925 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 GUCY1A2P33402 732 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 ZNF81P51508 661 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 SRSF4Q08170 494 aaKnown RBP4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 GEN1Q17RS7 908 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 ATP13A4Q4VNC1 1196 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 THNSL2Q86YJ6 484 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 LNX2Q8N448 690 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 APPBP2Q92624 585 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 MYOCQ99972 504 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 LDAHQ9H6V9 325 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 FAM30AQ9NZY2 134 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 HSFX1Q9UBD0 423 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 SCOCQ9UIL1 159 aa4.4□□□□□ -1.71
CBX3P1-201ENST00000325243 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 PROB1E7EW31 1015 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 ADRM1Q16186 407 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 DALRD3Q5D0E6 543 aaKnown RBP4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 PQLC1Q8N2U9 271 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 CLRN3Q8NCR9 226 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 SSH3Q8TE77 659 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 UBXN4Q92575 508 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 RAX2Q96IS3 184 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 UHRF1Q96T88 793 aaPredicted RBP4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 DMRT3Q9NQL9 472 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 KMT5AQ9NQR1 393 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 MOCS1Q9NZB8 636 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 DMTF1Q9Y222 760 aa4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 MTO1Q9Y2Z2 717 aaKnown RBP4.39□□□□□ -1.71
CBX3P1-201ENST00000325243 IL2RBP14784 551 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 BPIP17213 487 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 ID4P47928 161 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 PPP3CAQ08209 521 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 AKNAD1Q5T1N1 836 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 OTUD7BQ6GQQ9 843 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 UBE3BQ7Z3V4 1068 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 LEO1Q8WVC0 666 aaPredicted RBP4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 MFSD3Q96ES6 412 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 MARS2Q96GW9 593 aaKnown RBP4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 DRC1Q96MC2 740 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 UROC1Q96N76 676 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 ACAP3Q96P50 834 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 HEPHQ9BQS7 1158 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 PLAAQ9Y263 795 aa4.38□□□□□ -1.71
CBX3P1-201ENST00000325243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 PEX1O43933 1283 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 PCSK1P29120 753 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 PER3P56645 1201 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 NOMO3P69849 1222 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 NOMO1Q15155 1222 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 SF3B3Q15393 1217 aaKnown RBP4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 NOMO2Q5JPE7 1267 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 KIAA0895LQ68EN5 471 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 FOXR2Q6PJQ5 311 aa4.37□□□□□ -1.71
CBX3P1-201ENST00000325243 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms