RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 SH3BP1Q9Y3L3 701 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 PTGER2P43116 358 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 NPTX2P47972 431 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 GANCQ8TET4 914 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 TRIM56Q9BRZ2 755 aaKnown RBP13.58□□□□□ -0.24
CCDC149-201ENST00000324309 CHST12Q9NRB3 414 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 ALDH2P05091 517 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 MYBP10242 640 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 MX2P20592 715 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 RTP1P59025 263 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 NOP14P78316 857 aaKnown RBP13.58□□□□□ -0.24
CCDC149-201ENST00000324309 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 TRIM31Q9BZY9 425 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 INTUQ9ULD6 942 aa13.58□□□□□ -0.24
CCDC149-201ENST00000324309 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 MXRA7P84157 204 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 PTPAQ15257 358 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 FAM102AQ5T9C2 384 aaPredicted RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 LBX2Q6XYB7 198 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 SP110Q9HB58 689 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 ACKR2O00590 384 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 BSPRYQ5W0U4 402 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 OXCT2Q9BYC2 517 aaPredicted RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 FAN1Q9Y2M0 1017 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 RWDD3Q9Y3V2 267 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 MAPK13O15264 365 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 MED24O75448 989 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 DESI2Q9BSY9 194 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 CATSPERBQ9H7T0 1116 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 PLEKHA5Q9HAU0 1116 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 MTSS1O43312 755 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 UPP2O95045 317 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 VDRP11473 427 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 ACOT2P49753 483 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 OXCT1P55809 520 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 DNAAF3Q8N9W5 541 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 PPTC7Q8NI37 304 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 PPP1R13BQ96KQ4 1090 aa13.57□□□□□ -0.24
CCDC149-201ENST00000324309 TARS2Q9BW92 718 aaKnown RBP13.57□□□□□ -0.24
CCDC149-201ENST00000324309 CFAP69A5D8W1 941 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 ADCY6O43306 1168 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 NPEPPSP55786 919 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 IFT43Q96FT9 208 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 SMAPO00193 183 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 PAPOLAP51003 745 aaKnown RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 CPLX4Q7Z7G2 160 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 C11orf70Q9BRQ4 267 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 ENTPD7Q9NQZ7 604 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 EPHB3P54753 998 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 CUL1Q13616 776 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 GIT2Q14161 759 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 F9P00740 461 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 GRK4P32298 578 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 PPP2R5DQ14738 602 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
CCDC149-201ENST00000324309 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 FAM50BQ9Y247 325 aa13.56□□□□□ -0.24
CCDC149-201ENST00000324309 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
CCDC149-201ENST00000324309 INHBAP08476 426 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 TRIM49P0CI25 452 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 TRIM49CP0CI26 452 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
CCDC149-201ENST00000324309 MAP2K2P36507 400 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
CCDC149-201ENST00000324309 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 TMEM86AQ8N2M4 240 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 KRT35Q92764 455 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
CCDC149-201ENST00000324309 PLCD4Q9BRC7 762 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 RUSC1Q9BVN2 902 aa13.55□□□□□ -0.24
CCDC149-201ENST00000324309 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms