RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 DBR1Q9UK59 544 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 SLC9A1P19634 815 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 EMC2Q15006 297 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 SRLQ86TD4 932 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
SNRNP200-201ENST00000323853 ENTPD3O75355 529 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 TRIM62Q9BVG3 475 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 WWP1Q9H0M0 922 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 BNIP3LO60238 219 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 HNRNPCL1O60812 293 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ALDH18A1P54886 795 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 CUL3Q13618 768 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 IMPG1Q17R60 797 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PRR5LQ6MZQ0 368 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PLEKHA5Q9HAU0 1116 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ADA2Q9NZK5 511 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PRR12Q9ULL5 1215 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 NFKBIAP25963 317 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 REXO1L1PQ8IX06 675 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ACOT2P49753 483 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 CENPCQ03188 943 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 SMAD1Q15797 465 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ANGPTL8Q6UXH0 198 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 OR2W6PQ8NHA6 318 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ARHGEF26Q96DR7 871 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 BTBD6Q96KE9 485 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 MXRA8Q9BRK3 442 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 BFARQ9NZS9 450 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 DEPDC5O75140 1603 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 TYK2P29597 1187 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 PTPAQ15257 358 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 C18orf8Q96DM3 657 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-201ENST00000323853 E5RI56 91 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 CSPG5O95196 566 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ANP32DO95626 131 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 HMGCS2P54868 508 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SLC10A5Q5PT55 438 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 LONP2Q86WA8 852 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 KCTD17Q8N5Z5 321 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 LPAR1Q92633 364 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 NEU2Q9Y3R4 380 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 MXD4Q14582 209 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SNX19Q92543 992 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 DNAJC7Q99615 494 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ZNF70Q9UC06 446 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 P4HA2O15460 535 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 RFC5P40937 340 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 NCOA4Q13772 614 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 STILQ15468 1287 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 MAPRE2Q15555 327 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 CEP19Q96LK0 163 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 RBM15Q96T37 977 aaKnown RBP eCLIP11.5□□□□□ -0.572e-6■■■□□ 17.3
SNRNP200-201ENST00000323853 GGT7Q9UJ14 662 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 COMTP21964 271 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ELMOD1Q8N336 334 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 PDCD6IPQ8WUM4 868 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SEC16BQ96JE7 1060 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SLIT1O75093 1534 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 EXTL3O43909 919 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 LRRC23Q53EV4 343 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 CYP4F11Q9HBI6 524 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ZBBXA8MT70 800 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 FASTKD1Q53R41 847 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 SYCP2LQ5T4T6 812 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ZNF677Q86XU0 584 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 TNIP3Q96KP6 325 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 FAM167BQ9BTA0 163 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 TSSK1BQ9BXA7 367 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ROPN1BQ9BZX4 212 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 PPCSQ9HAB8 311 aa11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 ROPN1Q9HAT0 212 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-201ENST00000323853 PHF20L1A8MW92 1017 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms