RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MTRRQ9UBK8 725 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 TCHHQ07283 1943 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 TICRRQ7Z2Z1 1910 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 KRBA1A5PL33 1030 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 K7ERI5 159 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 ST18O60284 1047 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 FGFR3P22607 806 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 PDIA5Q14554 519 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 UPP1Q16831 310 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 HYIQ5T013 277 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 STAMQ92783 540 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 C18orf25Q96B23 403 aaPredicted RBP13.55□□□□□ -0.24
TPM3-204ENST00000323144 ZBTB45Q96K62 511 aaPredicted RBP13.55□□□□□ -0.24
TPM3-204ENST00000323144 PRRX2Q99811 253 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
TPM3-204ENST00000323144 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 FBXL21Q9UKT6 434 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 CA14Q9ULX7 337 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 NUMBLQ9Y6R0 609 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 CACNA1HO95180 2353 aa13.55□□□□□ -0.24
TPM3-204ENST00000323144 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 PODXLO00592 558 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 PI15O43692 258 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 B3GAT3O94766 335 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 SLC12A3P55017 1021 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 GRIN1Q05586 938 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 ELAVL2Q12926 359 aaKnown RBP13.54□□□□□ -0.24
TPM3-204ENST00000323144 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM3-204ENST00000323144 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 XKR4Q5GH76 650 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 PPM1LQ5SGD2 360 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 HAPLN2Q9GZV7 340 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 CNTN3Q9P232 1028 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 IGSF9Q9P2J2 1179 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
TPM3-204ENST00000323144 NUP210Q8TEM1 1887 aaPredicted RBP13.53□□□□□ -0.24
TPM3-204ENST00000323144 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 H3BQV1 296 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 CXCL8P10145 99 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 MAPTP10636 758 aaKnown RBP13.53□□□□□ -0.24
TPM3-204ENST00000323144 MCF2P10911 925 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 AOC1P19801 751 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 FSHRP23945 695 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 OR1D2P34982 312 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 ROR1Q01973 937 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 ITFG1Q8TB96 612 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 ING5Q8WYH8 240 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
TPM3-204ENST00000323144 FGF14Q92915 247 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 UROC1Q96N76 676 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
TPM3-204ENST00000323144 POLIQ9UNA4 740 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 OBSL1O75147 1896 aa13.53□□□□□ -0.24
TPM3-204ENST00000323144 ANHXE9PGG2 379 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 NRG2O14511 850 aaPredicted RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 GFRA3O60609 400 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 C1RP00736 705 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 HNRNPA1P09651 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPM3-204ENST00000323144 PLA2G4BP0C869 781 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 SRFP11831 508 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 LAMP2P13473 410 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 PLS3P13797 630 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 HOXA9P31269 272 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 RAB33AQ14088 237 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 AXDND1Q5T1B0 1012 aaPredicted RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 CCDC105Q8IYK2 499 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 SLC44A3Q8N4M1 653 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 SYT2Q8N9I0 419 aaPredicted RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 TBC1D17Q9HA65 648 aa13.52□□□□□ -0.25
TPM3-204ENST00000323144 KIF26AQ9ULI4 1882 aaPredicted RBP13.52□□□□□ -0.25
TPM3-204ENST00000323144 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 KCNE1P15382 129 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 TNFSF9P41273 254 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 CLCN5P51795 746 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 NCKAP1LP55160 1127 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 SPAG1Q07617 926 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
TPM3-204ENST00000323144 PARM1Q6UWI2 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms