RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MCOLN2Q8IZK6 566 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 FBXO25Q8TCJ0 367 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 KLRG1Q96E93 195 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 PORCNQ9H237 461 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 RABEP2Q9H5N1 569 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 LRRC19Q9H756 370 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 FAM169AQ9Y6X4 670 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 SPDYE16A6NNV3 312 aaPredicted RBP23.91■■□□□ 1.42
PNKP-201ENST00000322344 HLA-DRAP01903 254 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 C4BPAP04003 597 aaKnown RBP23.91■■□□□ 1.42
PNKP-201ENST00000322344 RARAP10276 462 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 TNNI1P19237 187 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 RPL21P46778 160 aaKnown RBP23.91■■□□□ 1.42
PNKP-201ENST00000322344 CDR1P51861 262 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 DENND2CQ68D51 928 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 C3orf20Q8ND61 904 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 DHX33Q9H6R0 707 aaKnown RBP23.91■■□□□ 1.42
PNKP-201ENST00000322344 NOVA2Q9UNW9 492 aaKnown RBP23.91■■□□□ 1.42
PNKP-201ENST00000322344 PPP2R3BQ9Y5P8 575 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 FSCN2O14926 492 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 PIK3CAP42336 1068 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 SLC20A2Q08357 652 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 SLMAPQ14BN4 828 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 TRIM72Q6ZMU5 477 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 MICALCLQ6ZW33 695 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 NLRP14Q86W24 1093 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 DEPTORQ8TB45 409 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 SLCO2A1Q92959 643 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 TLCD1Q96CP7 247 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 ANAPC7Q9UJX3 599 aa23.91■■□□□ 1.42
PNKP-201ENST00000322344 A0A087WUV0 522 aaPredicted RBP23.9■■□□□ 1.42
PNKP-201ENST00000322344 PPP1R2P3Q6NXS1 205 aa23.9■■□□□ 1.42
PNKP-201ENST00000322344 PPM1EQ8WY54 764 aa23.9■■□□□ 1.42
PNKP-201ENST00000322344 NIFKQ9BYG3 293 aaKnown RBP23.9■■□□□ 1.42
PNKP-201ENST00000322344 CNOT10Q9H9A5 744 aaKnown RBP23.9■■□□□ 1.42
PNKP-201ENST00000322344 ARL2P36404 184 aa23.89■■□□□ 1.42
PNKP-201ENST00000322344 CENPCQ03188 943 aa23.89■■□□□ 1.42
PNKP-201ENST00000322344 CPNE8Q86YQ8 564 aa23.89■■□□□ 1.42
PNKP-201ENST00000322344 ZNF473Q8WTR7 871 aaKnown RBP23.89■■□□□ 1.42
PNKP-201ENST00000322344 EPB41L4BQ9H329 900 aa23.89■■□□□ 1.42
PNKP-201ENST00000322344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.89■■□□□ 1.42
PNKP-201ENST00000322344 AFG3L2Q9Y4W6 797 aa23.89■■□□□ 1.42
PNKP-201ENST00000322344 LOC285556D6RIA3 1793 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 ECEL1O95672 775 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 FAM107AO95990 144 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 CYP1A1P04798 512 aaPredicted RBP23.89■■□□□ 1.41
PNKP-201ENST00000322344 PAEPP09466 180 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 ATP4AP20648 1035 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 GLRA2P23416 452 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 MAN1A1P33908 653 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 RFC5P40937 340 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 NSFP46459 744 aaKnown RBP23.89■■□□□ 1.41
PNKP-201ENST00000322344 NLRP11P59045 1033 aaKnown RBP23.89■■□□□ 1.41
PNKP-201ENST00000322344 SH3D19Q5HYK7 790 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 TDRD10Q5VZ19 366 aaKnown RBP23.89■■□□□ 1.41
PNKP-201ENST00000322344 MYCBPAPQ8TBZ2 947 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 ASAP3Q8TDY4 903 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 SLC7A3Q8WY07 619 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 ART4Q93070 314 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 CCT8L2Q96SF2 557 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 GGA2Q9UJY4 613 aa23.89■■□□□ 1.41
PNKP-201ENST00000322344 TCRBV7S2A1N4TA0A589 114 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 K7ERI5 159 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 ZBTB7AO95365 584 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 POTEJP0CG39 1038 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 MAGOHP61326 146 aaKnown RBP23.88■■□□□ 1.41
PNKP-201ENST00000322344 SP2Q02086 613 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 BYSLQ13895 437 aaKnown RBP23.88■■□□□ 1.41
PNKP-201ENST00000322344 KCTD19Q17RG1 926 aaPredicted RBP23.88■■□□□ 1.41
PNKP-201ENST00000322344 TMEM143Q96AN5 459 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 PGM2Q96G03 612 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 TMEM134Q9H6X4 195 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 RBAKQ9NYW8 714 aaPredicted RBP23.88■■□□□ 1.41
PNKP-201ENST00000322344 IGKV6D-21A0A0A0MT36 114 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 LIN9Q5TKA1 542 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 PRAMEF18Q5VWM3 479 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 SYDE1Q6ZW31 735 aaPredicted RBP23.88■■□□□ 1.41
PNKP-201ENST00000322344 CGRRF1Q99675 332 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 TMEM109Q9BVC6 243 aa23.88■■□□□ 1.41
PNKP-201ENST00000322344 MROH7Q68CQ1 1323 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 LRRIQ4A6NIV6 560 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 SORBS3O60504 671 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 TBXAS1P24557 533 aaPredicted RBP23.87■■□□□ 1.41
PNKP-201ENST00000322344 PTP4A2Q12974 167 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 CUL2Q13617 745 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 CRELD2Q6UXH1 353 aaPredicted RBP23.87■■□□□ 1.41
PNKP-201ENST00000322344 ELMO3Q96BJ8 720 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 VCPIP1Q96JH7 1222 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 CEP89Q96ST8 783 aa23.87■■□□□ 1.41
PNKP-201ENST00000322344 E7EVH7 732 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 CLDN3O15551 220 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 RARGP13631 454 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 ACO1P21399 889 aaKnown RBP23.86■■□□□ 1.41
PNKP-201ENST00000322344 RRM1P23921 792 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 ACOT2P49753 483 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 SGO2Q562F6 1265 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 LMBRD2Q68DH5 695 aaPredicted RBP23.86■■□□□ 1.41
PNKP-201ENST00000322344 RNF25Q96BH1 459 aaPredicted RBP23.86■■□□□ 1.41
PNKP-201ENST00000322344 MSTO1Q9BUK6 570 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 NRBP2Q9NSY0 501 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms