RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 PDHA1P08559 390 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 AMPD2Q01433 879 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
GCFC2-201ENST00000321027 ZNF667Q5HYK9 610 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 LRRC34Q8IZ02 419 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 EPS8L3Q8TE67 593 aaKnown RBP16.32■□□□□ 0.2
GCFC2-201ENST00000321027 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
GCFC2-201ENST00000321027 SLC24A3Q9HC58 644 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 GPRC5CQ9NQ84 441 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 GGA3Q9NZ52 723 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 ZFP69BQ9UJL9 534 aa16.32■□□□□ 0.2
GCFC2-201ENST00000321027 USP15Q9Y4E8 981 aaPredicted RBP16.32■□□□□ 0.2
GCFC2-201ENST00000321027 CDH16O75309 829 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 NR3C2P08235 984 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 PPP1R2P3Q6NXS1 205 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 PDZD8Q8NEN9 1154 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 CBWD1Q9BRT8 395 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 LRRC4Q9HBW1 653 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 KIAA1586Q9HCI6 787 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 IQANK1A0A1B0GTG1 560 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 MED7O43513 233 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ABCD1P33897 745 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 AARSP49588 968 aaKnown RBP eCLIP16.31■□□□□ 0.2
GCFC2-201ENST00000321027 P3H1Q32P28 736 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ZNF302Q9NR11 478 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 CFAP69A5D8W1 941 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 CCT8L1PA6NM43 557 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 DRP2Q13474 957 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 TRIM42Q8IWZ5 723 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 AGBL3Q8NEM8 1001 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 MED15Q96RN5 788 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 TRAIPQ9BWF2 469 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 TLK1Q9UKI8 766 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 COPEO14579 308 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 EIF3DO15371 548 aaKnown RBP eCLIP16.31■□□□□ 0.2
GCFC2-201ENST00000321027 KITP10721 976 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 RHBDL3P58872 404 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 SLC20A1Q8WUM9 679 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 ARL2BPQ9Y2Y0 163 aa16.31■□□□□ 0.2
GCFC2-201ENST00000321027 F5H423 210 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 CFLARO15519 480 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 CAP2P40123 477 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 SLC13A5Q86YT5 568 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 ACTRT1Q8TDG2 376 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 KCNH7Q9NS40 1196 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 AIPL1Q9NZN9 384 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 SGPL1O95470 568 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 NCF2P19878 526 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 ITGA8P53708 1063 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 PSMC1P62191 440 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 KCNA1Q09470 495 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 MAPK6Q16659 721 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 PACS2Q86VP3 889 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 POLR3CQ9BUI4 534 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 BAG5Q9UL15 447 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 UBE4BO95155 1302 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 F8VZ95 297 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 KRT37O76014 449 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 ITIH2P19823 946 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 TSTA3Q13630 321 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 KIF22Q14807 665 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 SPOPLQ6IQ16 392 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 JPH1Q9HDC5 661 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-201ENST00000321027 INPP5FQ9Y2H2 1132 aa16.3■□□□□ 0.2
GCFC2-201ENST00000321027 SPECC1L-ADORA2AF8WAN1 911 aa16.29■□□□□ 0.2
GCFC2-201ENST00000321027 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
GCFC2-201ENST00000321027 NR1H3Q13133 447 aa16.29■□□□□ 0.2
GCFC2-201ENST00000321027 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
GCFC2-201ENST00000321027 TTC25Q96NG3 672 aa16.29■□□□□ 0.2
GCFC2-201ENST00000321027 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
GCFC2-201ENST00000321027 KLF6Q99612 283 aaPredicted RBP16.29■□□□□ 0.2
GCFC2-201ENST00000321027 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
GCFC2-201ENST00000321027 DIAPH2O60879 1101 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms