RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 VPS41P49754 854 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 PPP2R5EQ16537 467 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
CRAT-201ENST00000318080 SLC13A5Q86YT5 568 aaPredicted RBP17.11■□□□□ 0.33
CRAT-201ENST00000318080 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
CRAT-201ENST00000318080 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
CRAT-201ENST00000318080 SLC26A4O43511 780 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 GAP43P17677 238 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 GPC5P78333 572 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 PPP1R15BQ5SWA1 713 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 SLC30A9Q6PML9 568 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 HS2ST1Q7LGA3 356 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
CRAT-201ENST00000318080 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 CD101Q93033 1021 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 MYLK2Q9H1R3 596 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 PAPOLBQ9NRJ5 636 aaKnown RBP17.11■□□□□ 0.33
CRAT-201ENST00000318080 FAM198AQ9UFP1 575 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
CRAT-201ENST00000318080 PODXLO00592 558 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 CETPP11597 493 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
CRAT-201ENST00000318080 C11orf63Q6NUN7 778 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 PHLDB2Q86SQ0 1253 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 SLC47A2Q86VL8 602 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 HERPUD2Q9BSE4 406 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
CRAT-201ENST00000318080 HIP1RO75146 1068 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 FOXN2P32314 431 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 RBBP5Q15291 538 aaKnown RBP17.1■□□□□ 0.33
CRAT-201ENST00000318080 KYNUQ16719 465 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 SEL1L2Q5TEA6 688 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
CRAT-201ENST00000318080 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 TEKT4Q8WW24 435 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 FAM118BQ9BPY3 351 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 TMEM109Q9BVC6 243 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 METTL5Q9NRN9 209 aaKnown RBP17.1■□□□□ 0.33
CRAT-201ENST00000318080 ARL2BPQ9Y2Y0 163 aa17.1■□□□□ 0.33
CRAT-201ENST00000318080 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CYP26A1O43174 497 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CBX6O95503 412 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 HLA-DOAP06340 250 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 EPHB2P29323 1055 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 ICA1Q05084 483 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CERKLQ49MI3 558 aaPredicted RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 TMEM154Q6P9G4 183 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 SH3BP5LQ7L8J4 393 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 DAW1Q8N136 415 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 ERP27Q96DN0 273 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CBWD1Q9BRT8 395 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 MKNK1Q9BUB5 465 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 MIF4GDA9UHW6 222 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 SPOPO43791 374 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 PEX11AO75192 247 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 NDUFB10O96000 172 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 CIITAP33076 1130 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 RRP1BQ14684 758 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 SRRM1Q8IYB3 904 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 MRRFQ96E11 262 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 NUP85Q9BW27 656 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 SLCO1B3Q9NPD5 702 aa17.09■□□□□ 0.33
CRAT-201ENST00000318080 G3BP2Q9UN86 482 aaKnown RBP17.09■□□□□ 0.33
CRAT-201ENST00000318080 ASTN2O75129 1339 aaPredicted RBP17.08■□□□□ 0.33
CRAT-201ENST00000318080 TCP10L2B9ZVM9 353 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 SPAG7O75391 227 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 BRAFP15056 766 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 GNAZP19086 355 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 POLE2P56282 527 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 FAM84AQ96KN4 292 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 RXFP1Q9HBX9 757 aa17.08■□□□□ 0.33
CRAT-201ENST00000318080 CFBP00751 764 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 ZNF131P52739 623 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 KRT17Q04695 432 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 SLMAPQ14BN4 828 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 VSIG1Q86XK7 387 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 DCAF4Q8WV16 495 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 NUDCD1Q96RS6 583 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 PKD2L1Q9P0L9 805 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
CRAT-201ENST00000318080 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
CRAT-201ENST00000318080 PSMD10O75832 226 aa17.07■□□□□ 0.32
CRAT-201ENST00000318080 RPS6KA3P51812 740 aa17.07■□□□□ 0.32
CRAT-201ENST00000318080 HADHBP55084 474 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms