RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-201ENST00000317677 APEX2Q9UBZ4 518 aa14.03□□□□□ -0.16
CPNE1-201ENST00000317677 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
CPNE1-201ENST00000317677 STYXL1Q9Y6J8 313 aa14.03□□□□□ -0.16
CPNE1-201ENST00000317677 MYH10P35580 1976 aa14.03□□□□□ -0.16
CPNE1-201ENST00000317677 EVPLQ92817 2033 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 LRRIQ4A6NIV6 560 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 F8VZ95 297 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 GPR25O00155 361 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 NOP56O00567 594 aaKnown RBP14.02□□□□□ -0.16
CPNE1-201ENST00000317677 PIGRP01833 764 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 GARTP22102 1010 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 ADCYAP1R1P41586 468 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 PDCD2Q16342 344 aaPredicted RBP14.02□□□□□ -0.16
CPNE1-201ENST00000317677 SLC18A3Q16572 532 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 FAM110CQ1W6H9 321 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 CEP57Q86XR8 500 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 P3H4Q92791 437 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 SEMA4DQ92854 862 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.16
CPNE1-201ENST00000317677 CAPN6Q9Y6Q1 641 aa14.02□□□□□ -0.16
CPNE1-201ENST00000317677 MACROD2A1Z1Q3 448 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 KRT86O43790 486 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 STRNO43815 780 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 MGRN1O60291 552 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 FKTNO75072 461 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 GFPT2O94808 682 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 LSP1P33241 339 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 CYP24A1Q07973 514 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-201ENST00000317677 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-201ENST00000317677 DNAAF5Q86Y56 855 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 LRRC71Q8N4P6 559 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 ZNF473Q8WTR7 871 aaKnown RBP14.02□□□□□ -0.17
CPNE1-201ENST00000317677 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-201ENST00000317677 PRPF31Q8WWY3 499 aaKnown RBP14.02□□□□□ -0.17
CPNE1-201ENST00000317677 MAML3Q96JK9 1138 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 SYT11Q9BT88 431 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 VTA1Q9NP79 307 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 ADAMTS1Q9UHI8 967 aa14.02□□□□□ -0.17
CPNE1-201ENST00000317677 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 ENC1O14682 589 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 PMM2O15305 246 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 P4HA2O15460 535 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 ADCY6O43306 1168 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 FAM107AO95990 144 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 GBP2P32456 591 aaPredicted RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 RPS6KA3P51812 740 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 ITIH3Q06033 890 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 KIF5AQ12840 1032 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 XRCC4Q13426 336 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 NAA25Q14CX7 972 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 LACTB2Q53H82 288 aaPredicted RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CRELD2Q6UXH1 353 aaPredicted RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 GPD1LQ8N335 351 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 DEPTORQ8TB45 409 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 KAT5Q92993 513 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CCDC127Q96BQ5 260 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CPSF2Q9P2I0 782 aaKnown RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 HDAC6Q9UBN7 1215 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CPA4Q9UI42 421 aa14.01□□□□□ -0.17
CPNE1-201ENST00000317677 TPX2Q9ULW0 747 aaKnown RBP14.01□□□□□ -0.17
CPNE1-201ENST00000317677 CCDC85CA6NKD9 419 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 H0YCG3 227 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 ADCY3O60266 1144 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 EVI5O60447 810 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 MOCS3O95396 460 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 GJB1P08034 283 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 SOX5P35711 763 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 MXI1P50539 228 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 NLRP11P59045 1033 aaKnown RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 LNX1Q8TBB1 728 aaPredicted RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 TMC2Q8TDI7 906 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 ZNF516Q92618 1163 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 ELMO3Q96BJ8 720 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 BICD1Q96G01 975 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 CCDC114Q96M63 670 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 TMEM134Q9H6X4 195 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 EBF2Q9HAK2 575 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 SAR1BQ9Y6B6 198 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
CPNE1-201ENST00000317677 EME2A4GXA9 379 aaPredicted RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 DDX3XO00571 662 aaKnown RBP eCLIP14□□□□□ -0.171e-14■■■□□ 17.4
CPNE1-201ENST00000317677 LIN7AO14910 233 aaPredicted RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
CPNE1-201ENST00000317677 LGALS2P05162 132 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms