RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 C18orf8Q96DM3 657 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 SYT11Q9BT88 431 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 RNF146Q9NTX7 359 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 LARSQ9P2J5 1176 aaKnown RBP20.74■□□□□ 0.91
ZNF554-201ENST00000317243 CNOT7Q9UIV1 285 aaKnown RBP20.74■□□□□ 0.91
ZNF554-201ENST00000317243 CTDP1Q9Y5B0 961 aaPredicted RBP20.74■□□□□ 0.91
ZNF554-201ENST00000317243 TMEM110-MUSTN1A8MSY1 372 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 RGS20O76081 388 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 BCRP11274 1271 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 PLS3P13797 630 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 ATP2A2P16615 1042 aaKnown RBP20.74■□□□□ 0.91
ZNF554-201ENST00000317243 VAMP7P51809 220 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 LRRC14Q15048 493 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 DALRD3Q5D0E6 543 aaKnown RBP20.74■□□□□ 0.91
ZNF554-201ENST00000317243 RFFLQ8WZ73 363 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 SEMA4DQ92854 862 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 ZDHHC18Q9NUE0 388 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 ADAM22Q9P0K1 906 aa20.74■□□□□ 0.91
ZNF554-201ENST00000317243 RWDD2BP57060 319 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 TAF11Q15544 211 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 DUPD1Q68J44 220 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 JAMLQ86YT9 394 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 ALG3Q92685 438 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 WRNIP1Q96S55 665 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 MKNK1Q9BUB5 465 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 OSBPL1AQ9BXW6 950 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 PABPC3Q9H361 631 aaKnown RBP20.73■□□□□ 0.91
ZNF554-201ENST00000317243 DNAH12Q6ZR08 3092 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 ADGRA3Q8IWK6 1321 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 PECAM1P16284 738 aaPredicted RBP20.73■□□□□ 0.91
ZNF554-201ENST00000317243 MSH2P43246 934 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 MKRN4PQ13434 485 aaPredicted RBP20.73■□□□□ 0.91
ZNF554-201ENST00000317243 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
ZNF554-201ENST00000317243 MGARPQ8TDB4 240 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 PGM2Q96G03 612 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 SEMA4AQ9H3S1 761 aa20.73■□□□□ 0.91
ZNF554-201ENST00000317243 FGFR4P22455 802 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 COPS2P61201 443 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 GNPTABQ3T906 1256 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 LMBRD2Q68DH5 695 aaPredicted RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 NSRP1Q9H0G5 558 aaKnown RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 FGFR1OP2Q9NVK5 253 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 ZFATQ9P243 1243 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 CPSF2Q9P2I0 782 aaKnown RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 PFASO15067 1338 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 A6NHS1 94 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 SGPL1O95470 568 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 MARCKSL1P49006 195 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 MCF2L2Q86YR7 1114 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 EPS8L3Q8TE67 593 aaKnown RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 DHX38Q92620 1227 aaKnown RBP20.72■□□□□ 0.91
ZNF554-201ENST00000317243 BTBD6Q96KE9 485 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 TMEM117Q9H0C3 514 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 INTUQ9ULD6 942 aa20.72■□□□□ 0.91
ZNF554-201ENST00000317243 TNIP1Q15025 636 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 GALNTL6Q49A17 601 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 LPAR1Q92633 364 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 GABBR1Q9UBS5 961 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 TCEAL9Q9UHQ7 104 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 USP15Q9Y4E8 981 aaPredicted RBP20.71■□□□□ 0.91
ZNF554-201ENST00000317243 RGPD3A6NKT7 1758 aaPredicted RBP20.71■□□□□ 0.91
ZNF554-201ENST00000317243 RGPD4Q7Z3J3 1758 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 NUDT17P0C025 328 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 ATP4AP20648 1035 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 LMNB1P20700 586 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 NFIL3Q16649 462 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 EPC2Q52LR7 807 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 STXBP4Q6ZWJ1 553 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 PCDHB18PQ96TA0 734 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 PI4K2AQ9BTU6 479 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 KCND2Q9NZV8 630 aa20.71■□□□□ 0.91
ZNF554-201ENST00000317243 DBR1Q9UK59 544 aaKnown RBP20.71■□□□□ 0.91
ZNF554-201ENST00000317243 WDR81Q562E7 1941 aa20.7■□□□□ 0.91
ZNF554-201ENST00000317243 TMEM253P0C7T8 217 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 TNFAIP3P21580 790 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 NPTX2P47972 431 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 CTCFP49711 727 aaPredicted RBP20.7■□□□□ 0.9
ZNF554-201ENST00000317243 PDE6CP51160 858 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 BNIP1Q12981 228 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 ANGEL2Q5VTE6 544 aaKnown RBP20.7■□□□□ 0.9
ZNF554-201ENST00000317243 SLC39A4Q6P5W5 647 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 SLC47A2Q86VL8 602 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 CCDC25Q86WR0 208 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 PPM1KQ8N3J5 372 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 NAF1Q96HR8 494 aaKnown RBP20.7■□□□□ 0.9
ZNF554-201ENST00000317243 ACCSQ96QU6 501 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 PTPN22Q9Y2R2 807 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 ZNF541Q9H0D2 1346 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 DPPA5A6NC42 116 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 KIAA0391O15091 583 aaKnown RBP20.7■□□□□ 0.9
ZNF554-201ENST00000317243 NR3C2P08235 984 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 PPATQ06203 517 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 ZDHHC24Q6UX98 284 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 PHLDB2Q86SQ0 1253 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 XXYLT1Q8NBI6 393 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 TRPM4Q8TD43 1214 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 DYDC1Q8WWB3 177 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 KREMEN1Q96MU8 473 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 CARD9Q9H257 536 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms