RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SERPING1P05155 500 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 LDHBP07195 334 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 HSPA1AP0DMV8 641 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 HSPA1BP0DMV9 641 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 POLR2EP19388 210 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 HMGB2P26583 209 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 COPB2P35606 906 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 NAA20P61599 178 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 PFKPQ01813 784 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 NR1D2Q14995 579 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 TRADDQ15628 312 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 HLFQ16534 295 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 CERKLQ49MI3 558 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 IL23RQ5VWK5 629 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 RRAGBQ5VZM2 374 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 LMBRD2Q68DH5 695 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 DTHD1Q6ZMT9 781 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 USP49Q70CQ1 688 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 VPS36Q86VN1 386 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 CROCCP3Q8IVE0 287 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 ARHGAP24Q8N264 748 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 TBC1D16Q8TBP0 767 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 ZNF384Q8TF68 577 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 INPP5DQ92835 1189 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 FAM89AQ96GI7 184 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 RUNDC3BQ96NL0 473 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 PSMB7Q99436 277 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 TUBGCP2Q9BSJ2 902 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 ISCUQ9H1K1 167 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 ARMT1Q9H993 441 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 DCP1AQ9NPI6 582 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 DDX18Q9NVP1 670 aaKnown RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-201ENST00000316433 STX8Q9UNK0 236 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 DUSP10Q9Y6W6 482 aa7.07□□□□□ -1.28
ZNF540-201ENST00000316433 NPHP3-ACAD11A0A0J9YXS1 232 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SH3PXD2BA1X283 911 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MTA2O94776 668 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 OR52Z1P0C646 297 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 VPS41P49754 854 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MXI1P50539 228 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 KIF11P52732 1056 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 EIF3BP55884 814 aaKnown RBP7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SLC34A1Q06495 639 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 WASHC5Q12768 1159 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 GIT2Q14161 759 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 CRY1Q16526 586 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 GPR162Q16538 588 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MYLK3Q32MK0 819 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 CFAP221Q4G0U5 840 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SNRNP48Q6IEG0 339 aaKnown RBP7.06□□□□□ -1.28
ZNF540-201ENST00000316433 VASH1Q7L8A9 365 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SATL1Q86VE3 508 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 DCLK2Q8N568 766 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 CCDC110Q8TBZ0 833 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 PLEKHO2Q8TD55 490 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MORC4Q8TE76 937 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 PARVGQ9HBI0 331 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 KCNJ14Q9UNX9 436 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 STXBP5LQ9Y2K9 1186 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 PCDHA2Q9Y5H9 948 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SPATA31A5Q5VU36 1347 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SPATA31A6Q5VVP1 1343 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 SPATA31A7Q8IWB4 1347 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MARCH6O60337 910 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 OR6B1O95007 311 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 NUDT17P0C025 328 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 MZF1P28698 734 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-201ENST00000316433 RAB15P59190 212 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 UBXN1Q04323 297 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 LMOD2Q6P5Q4 547 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 C16orf86Q6ZW13 317 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 CRYGNQ8WXF5 182 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 NYXQ9GZU5 481 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 ADAM7Q9H2U9 754 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 PCDHA13Q9Y5I0 950 aa7.06□□□□□ -1.28
ZNF540-201ENST00000316433 NOTOA8MTQ0 251 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 ZNF263O14978 683 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 CCDC159P0C7I6 412 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 FOSL1P15407 271 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 HSPA6P17066 643 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 GNA11P29992 359 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 ECHS1P30084 290 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 GRIA2P42262 883 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 IFNAR2P48551 515 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 GPC3P51654 580 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 CHRNDQ07001 517 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 NDUFA5Q16718 116 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 ZNF568Q3ZCX4 644 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 KHDC1Q4VXA5 237 aaKnown RBP7.05□□□□□ -1.28
ZNF540-201ENST00000316433 SLC27A3Q5K4L6 730 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 AGAP9Q5VTM2 703 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 OSTM1Q86WC4 334 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 KBTBD2Q8IY47 623 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 DDHD1Q8NEL9 900 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 SLCO2A1Q92959 643 aa7.05□□□□□ -1.28
ZNF540-201ENST00000316433 CNOT6LQ96LI5 555 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms