RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 C6orf118Q5T5N4 469 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ANO5Q75V66 913 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF720Q7Z2F6 126 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 NAP1L3Q99457 506 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 CARD9Q9H257 536 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 TRAF3IP3Q9Y228 551 aa18.39■□□□□ 0.53
SCAMP4-201ENST00000316097 CENPFP49454 3210 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 TISP43B9A030 160 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 RARAP10276 462 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 NAIF1Q69YI7 327 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 AADACL2Q6P093 401 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 CTNNBL1Q8WYA6 563 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 PRCCQ92733 491 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 C18orf8Q96DM3 657 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 CCDC134Q9H6E4 229 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 ECT2Q9H8V3 914 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 PCDHA10Q9Y5I2 948 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 PPP1R12AO14974 1030 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 GRIN3BO60391 1043 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 SNX3O60493 162 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 STAT1P42224 750 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 PSMC5P62195 406 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 KRT76Q01546 638 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 DHX34Q14147 1143 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 LRRC14Q15048 493 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 STXBP2Q15833 593 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 PPP2R5EQ16537 467 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 LDLRAD1Q5T700 205 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 MGARPQ8TDB4 240 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 OLFML3Q9NRN5 406 aa18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 NOP53Q9NZM5 478 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-201ENST00000316097 TULP1O00294 542 aaPredicted RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 CDC25CP30307 473 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 CNGA2Q16280 664 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 DYDC1Q8WWB3 177 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 ALG3Q92685 438 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 SLC35C1Q96A29 364 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 ARHGEF26Q96DR7 871 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 GRHL1Q9NZI5 618 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 DIS3Q9Y2L1 958 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 PCDHB13Q9Y5F0 798 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 NCANO14594 1321 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 SPATA31C2B4DYI2 1134 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 IGF2BP3O00425 579 aaKnown RBP eCLIP18.37■□□□□ 0.534e-9■□□□□ 8.1
SCAMP4-201ENST00000316097 DIAPH2O60879 1101 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 RPL21P46778 160 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 BZW1Q7L1Q6 419 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 KIF2BQ8N4N8 673 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 SLC9A2Q9UBY0 812 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 ZMYM2Q9UBW7 1377 aa18.37■□□□□ 0.53
SCAMP4-201ENST00000316097 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 TMEM253P0C7T8 217 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 GAP43P17677 238 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 MUTP22033 750 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 PDE6CP51160 858 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF131P52739 623 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 ACTR2P61160 394 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 SLC30A5Q8TAD4 765 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 OLIG1Q8TAK6 271 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF570Q96NI8 536 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 BATF3Q9NR55 127 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 SEPT11Q9NVA2 429 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 DOCK5Q9H7D0 1870 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 A8MUI8 341 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 RASGRF2O14827 1237 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 NR3C1P04150 777 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 JAK3P52333 1124 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 TMEM63BQ5T3F8 832 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 FAM102BQ5T8I3 360 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 RDH13Q8NBN7 331 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 SPDL1Q96EA4 605 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 KIFC3Q9BVG8 833 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 MTRF1LQ9UGC7 380 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 USP15Q9Y4E8 981 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 PDXKO00764 312 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 ALADP13716 330 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 CCNHP51946 323 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 KCTD17Q8N5Z5 321 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 KLHL29Q96CT2 875 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 PORCNQ9H237 461 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 FGFR1OP2Q9NVK5 253 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 STK38LQ9Y2H1 464 aa18.36■□□□□ 0.53
SCAMP4-201ENST00000316097 SFNP31947 248 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 SOX5P35711 763 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 PTGIRP43119 386 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 DRG2P55039 364 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 AUHQ13825 339 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 ZNF746Q6NUN9 644 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 OTUD6AQ7L8S5 288 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 THAP2Q9H0W7 228 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 METTL14Q9HCE5 456 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 TCP11X1B4DZS4 312 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms