RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TOM1L1O75674 476 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 HOXC6P09630 235 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 TNFAIP3P21580 790 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PTENP60484 403 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 FKBP1BP68106 108 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 MAP2K5Q13163 448 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 FAM71AQ8IYT1 594 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 SHC3Q92529 594 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PTPRHQ9HD43 1115 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 VTA1Q9NP79 307 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 LOXHD1Q8IVV2 1947 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 EFCAB8A8MWE9 144 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PIK3R2O00459 728 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 MYL3P08590 195 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 AKAP5P24588 427 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 GPC3P51654 580 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 NOP14P78316 857 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 NCOA4Q13772 614 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PSMD6Q15008 389 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 CCDC142Q17RM4 750 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 CXCL17Q6UXB2 119 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DAAM2Q86T65 1068 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 LRRC57Q8N9N7 239 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 TRIB2Q92519 343 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 KRT35Q92764 455 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 NT5C1BQ96P26 610 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 MRPL4Q9BYD3 311 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 KLK14Q9P0G3 267 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DMGDHQ9UI17 866 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PASKQ96RG2 1323 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 KCNK3O14649 394 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PHACTR2O75167 634 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 SMIM10L2AP0DMW4 78 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 SMIM10L2BP0DMW5 78 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 ITGA4P13612 1032 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 FERP16591 822 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 MAPK4P31152 587 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PRKCZQ05513 592 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 KIF22Q14807 665 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DCAF12L1Q5VU92 463 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 RNF39Q9H2S5 420 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 FZD8Q9H461 694 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 PDZD7Q9H5P4 517 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 FBXL5Q9UKA1 691 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 COQ4Q9Y3A0 265 aa7.53□□□□□ -1.2
LYSMD3-201ENST00000315948 LACTBL1A8MY62 500 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 PPFIA4O75335 1185 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 SLC10A3P09131 477 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 CTSHP09668 335 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 H2AFZP0C0S5 128 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 H2AFXP16104 143 aaPredicted RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 PPARDQ03181 441 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 MYBPC2Q14324 1141 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 H2AFVQ71UI9 128 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 TRIM58Q8NG06 486 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 ALG3Q92685 438 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 LRRC1Q9BTT6 524 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 SIX4Q9UIU6 781 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 CPSF3Q9UKF6 684 aaKnown RBP7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 JRKLQ9Y4A0 524 aa7.52□□□□□ -1.2
LYSMD3-201ENST00000315948 CTAGE15A4D2H0 777 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 KIF3CO14782 793 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 CTAGE8P0CG41 777 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 PSMC4P43686 418 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 FLT3LGP49771 235 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 JADE1Q6IE81 842 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 CTAGE6Q86UF2 777 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 CTAGE4Q8IX94 777 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 LINC01465Q8N7H1 131 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM167AQ96KS9 214 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 TWNKQ96RR1 684 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 SLC5A4Q9NY91 659 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 SLC45A1Q9Y2W3 748 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 ACKR2O00590 384 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 STAG3L1P0CL83 205 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 MXD4Q14582 209 aaPredicted RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 DGKDQ16760 1214 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 KCNV1Q6PIU1 500 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 ZBTB8OSQ8IWT0 167 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 TMC2Q8TDI7 906 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 TFAP2BQ92481 460 aa7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 C18orf25Q96B23 403 aaPredicted RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 ZMAT2Q96NC0 199 aaKnown RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
LYSMD3-201ENST00000315948 NXF3Q9H4D5 531 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms