RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 SYNPO2Q9UMS6 1093 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 TRAF3IP3Q9Y228 551 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 A0A0J9YVX5 310 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 LRRC10BA6NIK2 292 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 KRT36O76013 467 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ALADP13716 330 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 IFNAR1P17181 557 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PMS2P54278 862 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 GPATCH4Q5T3I0 446 aaKnown RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 HSPBAP1Q96EW2 488 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF184Q99676 751 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 SEPT11Q9NVA2 429 aaKnown RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 RWDD2AQ9UIY3 292 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ITGB1BP2Q9UKP3 347 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 NID2Q14112 1375 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMEM120BA0PK00 339 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PGRMC1O00264 195 aaKnown RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PTPREP23469 700 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 MTMR2Q13614 643 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 SLC29A2Q14542 456 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 KCTD1Q719H9 257 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PIGWQ7Z7B1 504 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 CCDC110Q8TBZ0 833 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 U2AF1L4Q8WU68 220 aaKnown RBP12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 CIDEBQ9UHD4 219 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 SNCAIPQ9Y6H5 919 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PBX1P40424 430 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPIDQ08752 370 aaKnown RBP12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PTPAQ15257 358 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 TRIM51Q9BSJ1 452 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 CFAP69A5D8W1 941 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 HTR3EA5X5Y0 456 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 ACSL3O95573 720 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 BMP3P12645 472 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PRLRP16471 622 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPP1R2P41236 205 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 FKBP1BP68106 108 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 C16orf72Q14CZ0 275 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PATL1Q86TB9 770 aaKnown RBP12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 NAT14Q8WUY8 206 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 FNBP1Q96RU3 617 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 TIPINQ9BVW5 301 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 SELENONQ9NZV5 590 aa12.4□□□□□ -0.42
LDLRAD3-201ENST00000315571 PDLIM1O00151 329 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 ASMTLO95671 621 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 NAA20P61599 178 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 HPCAP84074 193 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 MYBPC2Q14324 1141 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 ACAP1Q15027 740 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 CROCCP2Q86T23 111 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC10A4Q96EP9 437 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 ZNF333Q96JL9 665 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 FAM161BQ96MY7 647 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 DNAJC7Q99615 494 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 KIAA1683Q9H0B3 1180 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 DENND2DQ9H6A0 471 aaPredicted RBP12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 ZFP69BQ9UJL9 534 aa12.4□□□□□ -0.43
LDLRAD3-201ENST00000315571 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 XPOTO43592 962 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 BRAFP15056 766 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 FGFR4P22455 802 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 ATP5DP30049 168 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC34A1Q06495 639 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 CYTH1Q15438 398 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 UAP1Q16222 522 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARHGAP24Q8N264 748 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 NDE1Q9NXR1 346 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 DCTN4Q9UJW0 460 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 SNHG28P0DPA3 235 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 BCRP11274 1271 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 NTRK3Q16288 839 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 SH3D19Q5HYK7 790 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms