RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 CBWD1Q9BRT8 395 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 USP40Q9NVE5 1235 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 PLA2G4CQ9UP65 541 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 ALG6Q9Y672 507 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 FAM196BA6NMK8 535 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 PRPF4O43172 522 aaKnown RBP eCLIP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 SORBS3O60504 671 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 NR1D1P20393 614 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 IL4RP24394 825 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 HOXC8P31273 242 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 LMNB2Q03252 620 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 GRM1Q13255 1194 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 DRAP1Q14919 205 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 PGM5Q15124 567 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 ICE2Q659A1 982 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 PHF13Q86YI8 300 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 DYDC2Q96IM9 177 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 CLMNQ96JQ2 1002 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 CAPZA3Q96KX2 299 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 SEMA4AQ9H3S1 761 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 ZNHIT6Q9NWK9 470 aaKnown RBP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 MTMR10Q9NXD2 777 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 WHRNQ9P202 907 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-201ENST00000315544 STK24Q9Y6E0 443 aa8.44□□□□□ -1.06
CNOT4-201ENST00000315544 ATP2C2O75185 946 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 FOSP01100 380 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 PFKMP08237 780 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 RARGP13631 454 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 OAZ1P54368 228 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 NCALDP61601 193 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ELF3P78545 371 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CCDC43Q96MW1 224 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 KRT12Q99456 494 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 AGPAT1Q99943 283 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CAPN14A8MX76 684 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF195O14628 629 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SNX3O60493 162 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 NPTXRO95502 500 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 GGPS1O95749 300 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CTCFP49711 727 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 AMHR2Q16671 573 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SLC4A8Q2Y0W8 1093 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 TMEM151AQ8N4L1 468 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SLC35B2Q8TB61 432 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 GLG1Q92896 1179 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 GDAP1L1Q96MZ0 367 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF570Q96NI8 536 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 TRIM51Q9BSJ1 452 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 DDX47Q9H0S4 455 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 UPF3AQ9H1J1 476 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 PCDHA1Q9Y5I3 950 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 MKI67P46013 3256 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 A6NNZ2 444 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 AOC2O75106 756 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 HSPA1AP0DMV8 641 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 HSPA1BP0DMV9 641 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SCTRP47872 440 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 SREBF2Q12772 1141 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 TUBB8Q3ZCM7 444 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CEP55Q53EZ4 464 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 CCSAPQ6IQ19 270 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 GLYCTKQ8IVS8 523 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 FAF2Q96CS3 445 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ZNF333Q96JL9 665 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 WDR11Q9BZH6 1224 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 RIPK3Q9Y572 518 aa8.43□□□□□ -1.06
CNOT4-201ENST00000315544 ERICH4A6NGS2 130 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 PLS3P13797 630 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 ZACNQ401N2 412 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 FBXW10Q5XX13 1052 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 PLA2G4FQ68DD2 849 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 HVCN1Q96D96 273 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 SEC16BQ96JE7 1060 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 RASSF4Q9H2L5 321 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 MIA3Q5JRA6 1907 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 GOLGA6CA6NDK9 693 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 C19orf81C9J6K1 198 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 PGRMC1O00264 195 aaKnown RBP8.42□□□□□ -1.06
CNOT4-201ENST00000315544 ZBED4O75132 1171 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 TACC1O75410 805 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 GOLGA6DP0CG33 693 aa8.42□□□□□ -1.06
CNOT4-201ENST00000315544 TMOD1P28289 359 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms