RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CCHCR1Q8TD31 782 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 WHAMMQ8TF30 809 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 SLC35C1Q96A29 364 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 THPOP40225 353 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 PSMC4P43686 418 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 RGS7P49802 495 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 INHBEP58166 350 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 GLRA4Q5JXX5 417 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 REXO1L1PQ8IX06 675 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 KLK14Q9P0G3 267 aa14.54□□□□□ -0.08
DDX54-202ENST00000314045 ADCY3O60266 1144 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 TMEM253P0C7T8 217 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 CYP2C19P33261 490 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 ITGB3BPQ13352 177 aaPredicted RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 CUL2Q13617 745 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 STILQ15468 1287 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 EMBQ6PCB8 327 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 PLCD3Q8N3E9 789 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 CUL1Q13616 776 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 CASP8Q14790 479 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 GRIK4Q16099 956 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 IQSEC1Q6DN90 963 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 GLB1LQ6UWU2 654 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 TTC13Q8NBP0 860 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.085e-9■■■■■ 55.3
DDX54-202ENST00000314045 FAM71BQ8TC56 605 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 INPP4AQ96PE3 977 aaPredicted RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 OSMRQ99650 979 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 HEY1Q9Y5J3 304 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 GTPBP10A4D1E9 387 aaKnown RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 PIK3R2O00459 728 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 ZNF185O15231 689 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 GTF2H1P32780 548 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 CCDC13Q8IYE1 715 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 FAM49BQ9NUQ9 324 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 CPSF3Q9UKF6 684 aaKnown RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 NOC2LQ9Y3T9 749 aaKnown RBP14.53□□□□□ -0.08
DDX54-202ENST00000314045 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 PKD1L3Q7Z443 1732 aa14.53□□□□□ -0.08
DDX54-202ENST00000314045 ZBBXA8MT70 800 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 SPATA31C2B4DYI2 1134 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 SLC12A2P55011 1212 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 TAP1Q03518 808 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 DCAF4L1Q3SXM0 396 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 GPAT2Q6NUI2 795 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 SLC38A7Q9NVC3 462 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 DNAJC17Q9NVM6 304 aaKnown RBP14.52□□□□□ -0.08
DDX54-202ENST00000314045 WDR35Q9P2L0 1181 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 STAG3L1P0CL83 205 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 STX2P32856 288 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 GABPB1Q06547 395 aaPredicted RBP14.52□□□□□ -0.08
DDX54-202ENST00000314045 ECM1Q16610 540 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 BBS9Q3SYG4 887 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 CELF3Q5SZQ8 465 aaKnown RBP14.52□□□□□ -0.08
DDX54-202ENST00000314045 TLK2Q86UE8 772 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 MICAL1Q8TDZ2 1067 aa14.52□□□□□ -0.08
DDX54-202ENST00000314045 ESYT3A0FGR9 886 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 GRID2IPA4D2P6 1211 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 TRAPPC3O43617 180 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 MXRA7P84157 204 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 SF3A3Q12874 501 aaKnown RBP eCLIP14.52□□□□□ -0.092e-7■■■■■ 49.4
DDX54-202ENST00000314045 RRP1BQ14684 758 aaKnown RBP14.52□□□□□ -0.09
DDX54-202ENST00000314045 SLMAPQ14BN4 828 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 SETDB1Q15047 1291 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 CFAP157Q5JU67 520 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 BZW1Q7L1Q6 419 aaKnown RBP14.52□□□□□ -0.09
DDX54-202ENST00000314045 TRAPPC11Q7Z392 1133 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 ATP2A3Q93084 1043 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 WNK4Q96J92 1243 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 CGRRF1Q99675 332 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 ARHGAP20Q9P2F6 1191 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 UBQLN1Q9UMX0 589 aaKnown RBP14.52□□□□□ -0.09
DDX54-202ENST00000314045 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 STAMBPO95630 424 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 PRPSAP1Q14558 356 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.09
DDX54-202ENST00000314045 RGMBQ6NW40 437 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 DLK2Q6UY11 383 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 BBS5Q8N3I7 341 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 DNAAF3Q8N9W5 541 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 SOCS4Q8WXH5 440 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 TBC1D31Q96DN5 1066 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 GOLPH3Q9H4A6 298 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 AFG3L2Q9Y4W6 797 aa14.52□□□□□ -0.09
DDX54-202ENST00000314045 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
DDX54-202ENST00000314045 TYW5A2RUC4 315 aaKnown RBP14.51□□□□□ -0.09
DDX54-202ENST00000314045 TADA3O75528 432 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 LCP1P13796 627 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 NYAP1Q6ZVC0 841 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 PDIK1LQ8N165 341 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 LACRTQ9GZZ8 138 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
DDX54-202ENST00000314045 TISP43B9A030 160 aa14.51□□□□□ -0.09
DDX54-202ENST00000314045 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms