RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 UNC80Q8N2C7 3258 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 KRT13P13646 458 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 CYP3A5P20815 502 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 DLG4P78352 724 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 SPAG1Q07617 926 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 DSC1Q08554 894 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 GRIK3Q13003 919 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 GLRA4Q5JXX5 417 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM117BQ6P1L5 589 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 WDR49Q8IV35 697 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 CMTR2Q8IYT2 770 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 TDHQ8IZJ6 230 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 RAD9AQ99638 391 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 INTS13Q9NVM9 706 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
CHMP2A-201ENST00000312547 BECN2A8MW95 431 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 KCNJ18B7U540 433 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 B4GALT3O60512 393 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 DDHD2O94830 711 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 POMCP01189 267 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 THP07101 528 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 SOX4Q06945 474 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 KCNJ12Q14500 433 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 USP37Q86T82 979 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 OR5B17Q8NGF7 314 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 CXorf38Q8TB03 319 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-201ENST00000312547 PTPRSQ13332 1948 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 LINC00271P0C7V0 271 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 ATP1A3P13637 1013 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 LRPAP1P30533 357 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 GTF2H1P32780 548 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 AP3M2P53677 418 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 TUSC3Q13454 348 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 HSP90AA4PQ58FG1 418 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 CWH43Q9H720 699 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 LIMA1Q9UHB6 759 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-201ENST00000312547 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 PMM2O15305 246 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 TLL1O43897 1013 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 TNNI1P19237 187 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 RABGGTBP53611 331 aa13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-201ENST00000312547 KRT31Q15323 416 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms