RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 MAPTP10636 758 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CDH2P19022 906 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CCR3P51677 355 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PNOCQ13519 176 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PDIA6Q15084 440 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DIXDC1Q155Q3 683 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PTPROQ16827 1216 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ACCSLQ4AC99 568 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 OR6B2Q6IFH4 312 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 KIF12Q96FN5 646 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GIMAP4Q9NUV9 329 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PKD2L2Q9NZM6 624 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 STOML1Q9UBI4 398 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 UBQLN1Q9UMX0 589 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PLA2G4CQ9UP65 541 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 BCORL1Q5H9F3 1711 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 UBR1Q8IWV7 1749 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CROCCQ5TZA2 2017 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GPR75-ASB3A0A0A6YYF3 556 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RASSF10A6NK89 507 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 C2orf81A6NN90 581 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RTN3O95197 1032 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 BCAR1P56945 870 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PPIL2Q13356 520 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MTMR2Q13614 643 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GIT2Q14161 759 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ANGEL2Q5VTE6 544 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SWSAP1Q6NVH7 229 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SCYL3Q8IZE3 742 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ATP6V0D2Q8N8Y2 350 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 EDC3Q96F86 508 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 FAM84BQ96KN1 310 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF512Q96ME7 567 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ADGRE3Q9BY15 652 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 XPO4Q9C0E2 1151 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MTMR12Q9C0I1 747 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GOLPH3LQ9H4A5 285 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ARMC7Q9H6L4 198 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ANAPC7Q9UJX3 599 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CHD2O14647 1828 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PHLPP1O60346 1717 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SNTNA6NMZ2 147 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MAPK13O15264 365 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ICAM1P05362 532 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HOXB8P17481 243 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MARK3P27448 753 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MAPK8P45983 427 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TAF6P49848 677 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MKRN3Q13064 507 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ART3Q13508 389 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SLFNL1Q499Z3 407 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TCP11X2Q5H9J9 407 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ARMC6Q6NXE6 501 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HERC6Q8IVU3 1022 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ENAHQ8N8S7 591 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MAGEB10Q96LZ2 347 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHA5Q9Y5H7 936 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MROH1Q8NDA8 1641 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CASZ1Q86V15 1759 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 KANSL1LA0AUZ9 987 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PDE2AO00408 941 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ERN1O75460 977 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 FBXO21O94952 628 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NR3C1P04150 777 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 KRT1P04264 644 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ACADMP11310 421 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CYP27A1Q02318 531 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 LRMPQ12912 555 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PTK6Q13882 451 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SPARCL1Q14515 664 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC149Q6ZUS6 474 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NIPA1Q7RTP0 329 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CEP57Q86XR8 500 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PGBD3Q8N328 593 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PIP4K2CQ8TBX8 421 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SH3KBP1Q96B97 665 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 EIF2AK1Q9BQI3 630 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MYL10Q9BUA6 226 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 INTUQ9ULD6 942 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 A0A088AWK7 358 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 LRRD1A4D1F6 860 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 FAM200BP0CF97 657 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MYBL2P10244 700 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ITGB6P18564 788 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF10P21506 573 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 GUCY2CP25092 1073 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ATXN3P54252 364 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TP53BP2Q13625 1128 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RESP18Q5W5W9 173 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TRIM67Q6ZTA4 783 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MYLK4Q86YV6 388 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PDCD7Q8N8D1 485 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PUS7LQ9H0K6 701 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 WDR41Q9HAD4 459 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SLC25A13Q9UJS0 675 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SPEF2Q9C093 1822 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 JAK2O60674 1132 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC22O60826 627 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms