RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GOLGA8IPA6NC78 632 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 GOLGA8JA6NMD2 632 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 KRT13P13646 458 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CD44P16070 742 aaKnown RBP19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CTNNB1P35222 781 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 UBE3AQ05086 875 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CYP24A1Q07973 514 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CEP135Q66GS9 1140 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 ANKRD40Q6AI12 368 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 TTI2Q6NXR4 508 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 KCNT2Q6UVM3 1135 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CBWD2Q8IUF1 395 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 WDR49Q8IV35 697 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 COLGALT1Q8NBJ5 622 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 FAM212AQ96EL1 285 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 MFSD14AQ96MC6 490 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 COLEC11Q9BWP8 271 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 ZNF576Q9H609 170 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 NRDE2Q9H7Z3 1164 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 METTL14Q9HCE5 456 aaKnown RBP19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
SSSCA1-201ENST00000309328 CAVIN2O95810 425 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 GALTP07902 379 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 PRKCSHP14314 528 aaPredicted RBP19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 AFF1P51825 1210 aaKnown RBP19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 BCAR1P56945 870 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 KRT17Q04695 432 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 ZBTB6Q15916 424 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 EPC2Q52LR7 807 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 SPATA1Q5VX52 437 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 FAM186BQ8IYM0 893 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 CSGALNACT2Q8N6G5 542 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 TMC2Q8TDI7 906 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 MIOSQ9NXC5 875 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 LZTS1Q9Y250 596 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 FAN1Q9Y2M0 1017 aa19.4■□□□□ 0.7
SSSCA1-201ENST00000309328 PTPRSQ13332 1948 aa19.39■□□□□ 0.7
SSSCA1-201ENST00000309328 TMEM189-UBE2V1I3L0A0 370 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 IKBKBO14920 756 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 STX10O60499 249 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 LINC00271P0C7V0 271 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 LRPAP1P30533 357 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 PLCB3Q01970 1234 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 ELAVL2Q12926 359 aaKnown RBP19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 BMS1Q14692 1282 aaKnown RBP19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 NAB2Q15742 525 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 DUOXA2Q1HG44 320 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 GLRA4Q5JXX5 417 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 JADE1Q6IE81 842 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 FILIP1Q7Z7B0 1213 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 ZNF280BQ86YH2 543 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 FBXO22Q8NEZ5 403 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 TMEM169Q96HH4 297 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 ANKRD36BP1Q96IX9 119 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 ZMAT2Q96NC0 199 aaKnown RBP19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 LMAN2LQ9H0V9 348 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 PUF60Q9UHX1 559 aaKnown RBP19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 PLAGL2Q9UPG8 496 aa19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 R3HCC1Q9Y3T6 440 aaKnown RBP19.39■□□□□ 0.69
SSSCA1-201ENST00000309328 RBAK-RBAKDNI3L0D1 243 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 TRAPPC3O43617 180 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 AKAP3O75969 853 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 DDHD2O94830 711 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 TNNC2P02585 160 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 TMEM191BP0C7N4 346 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 MCCD1P59942 119 aaPredicted RBP19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 TYRO3Q06418 890 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 TPD52L1Q16890 204 aaPredicted RBP19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 DCLRE1AQ6PJP8 1040 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 FAM114A1Q8IWE2 563 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 SLC39A11Q8N1S5 342 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 RDH13Q8NBN7 331 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 CGRRF1Q99675 332 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 ITGA11Q9UKX5 1188 aa19.38■□□□□ 0.69
SSSCA1-201ENST00000309328 ARHGEF37A1IGU5 675 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 TRIM49BA6NDI0 452 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 H3BNC9 293 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 SOX1O00570 391 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 NRP1O14786 923 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 MEFVO15553 781 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 NFICP08651 508 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 PNPLA4P41247 253 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 OR1G1P47890 313 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 SLC11A1P49279 550 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 PMS1P54277 932 aaKnown RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 CLDN10P78369 228 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 TFAMQ00059 246 aaKnown RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 UPP1Q16831 310 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 FRMD5Q7Z6J6 570 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 ZSWIM2Q8NEG5 633 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 PARD3BQ8TEW8 1205 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 IGSF21Q96ID5 467 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 C17orf80Q9BSJ5 609 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 PDE11AQ9HCR9 933 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 INTS13Q9NVM9 706 aa19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 FNDC1Q4ZHG4 1894 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-201ENST00000309328 SF3B1O75533 1304 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 CASTOR2A6NHX0 329 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms