RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 RASSF3Q86WH2 238 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 HIPK4Q8NE63 616 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PCDH18Q9HCL0 1135 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 STK17AQ9UEE5 414 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ANGPTL2Q9UKU9 493 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ZNRF3Q9ULT6 936 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PVALEFA0A1B0GWK0 134 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ARHGAP42A6NI28 874 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 MAPK13O15264 365 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 TJP3O95049 919 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 GFAPP14136 432 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 DPEP1P16444 411 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 LRRC63Q05C16 580 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 KCNA1Q09470 495 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 C1orf228Q6PIY5 440 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 IQCF2Q8IXL9 164 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RUBCNQ92622 972 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 TRAF3IP3Q9Y228 551 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ASAP2O43150 1006 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RAD17O75943 681 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PPP1R2P41236 205 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PTK2Q05397 1052 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 GRAMD1BQ3KR37 738 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 CCDC17Q96LX7 622 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RSPH10B2B2RC85 870 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 MED24O75448 989 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RSPH10BP0C881 870 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 RARAP10276 462 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 NR2F2P24468 414 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 DCTN2Q13561 401 aaKnown RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PRR16Q569H4 304 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PEX26Q7Z412 305 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ZFPM1Q8IX07 1006 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 OSBPL10Q9BXB5 764 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ANLNQ9NQW6 1124 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 DLEC1Q9Y238 1755 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 KDM1AO60341 852 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 TSPAN9O75954 239 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 GNA14O95837 355 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 HOXD12P35452 270 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 IZUMO2Q6UXV1 221 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 TUBGCP4Q9UGJ1 667 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 MAGEB3O15480 346 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 PGM3O95394 542 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 MARK3P27448 753 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 COPB2P35606 906 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SERPINB8P50452 374 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 MED21Q13503 144 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ASIC2Q16515 512 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ERMARDQ5T6L9 678 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 NOP9Q86U38 636 aaKnown RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 FAM161BQ96MY7 647 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 RNF14Q9UBS8 474 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF510Q9Y2H8 683 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ATP5HO75947 161 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SERPING1P05155 500 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ATP5DP30049 168 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 ARL1P40616 181 aaPredicted RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 NFIAQ12857 509 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 C16orf72Q14CZ0 275 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 PSMD6Q15008 389 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 CEP72Q9P209 647 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 AJAP1Q9UKB5 411 aaPredicted RBP11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SNX24Q9Y343 169 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SCINQ9Y6U3 715 aa11.09□□□□□ -0.63
MSRB3-201ENST00000308259 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.63
MSRB3-201ENST00000308259 ECE2O60344 883 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 MYBP10242 640 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 CASP4P49662 377 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 SGSM1Q2NKQ1 1148 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms