RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GLI1P08151 1106 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ZNF286BP0CG31 522 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 KRT5P13647 590 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 FKBP1BP68106 108 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 GPC5P78333 572 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 GRB14Q14449 540 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 SMC1AQ14683 1233 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 TSHZ1Q6ZSZ6 1077 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ENOSF1Q7L5Y1 443 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ZNF467Q7Z7K2 595 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 CDR2LQ86X02 465 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 BRSK2Q8IWQ3 736 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 LINC01465Q8N7H1 131 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 PPTC7Q8NI37 304 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 TAF4BQ92750 862 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 NLRP4Q96MN2 994 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 VTA1Q9NP79 307 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ZSCAN5CA6NGD5 496 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 GH1P01241 217 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CFHP08603 1231 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 PDE6CP51160 858 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 PTENP60484 403 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 IGBP1P78318 339 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 MBTD1Q05BQ5 628 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 EEF1DP3Q658K8 133 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CPNE8Q86YQ8 564 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 RHOT2Q8IXI1 618 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 EXOC8Q8IYI6 725 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 AENQ8WTP8 325 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 MAML3Q96JK9 1138 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 GDAP1L1Q96MZ0 367 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 KRT12Q99456 494 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 TCHPQ9BT92 498 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ZCCHC17Q9NP64 241 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 STIM2Q9P246 746 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CPSF3Q9UKF6 684 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 AMFRQ9UKV5 643 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ALG6Q9Y672 507 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 EVPLQ92817 2033 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 H3BQF6 201 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ACKR2O00590 384 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 OGTO15294 1046 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 MEFVO15553 781 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 CSDE1O75534 798 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 MTA2O94776 668 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CYP1A2P05177 515 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 UNGP13051 313 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 ITGA4P13612 1032 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 SMPD1P17405 629 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CUL2Q13617 745 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 TRADDQ15628 312 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 KCTD19Q17RG1 926 aaPredicted RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 CLEC16AQ2KHT3 1053 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 WDR44Q5JSH3 913 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 C8orf74Q6P047 294 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CEP120Q8N960 986 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 ALG3Q92685 438 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 BTBD6Q96KE9 485 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP47-201ENST00000305481 AP1M1Q9BXS5 423 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 C2orf40Q9H1Z8 148 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CTTNBP2NLQ9P2B4 639 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CNTN6Q9UQ52 1028 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 NOC2LQ9Y3T9 749 aaKnown RBP7.03□□□□□ -1.28
USP47-201ENST00000305481 INO80B-WBP1J3KQ70 363 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CLTAP09496 248 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 MCM3P25205 808 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 GRM1Q13255 1194 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NCOA4Q13772 614 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 GLE1Q53GS7 698 aaKnown RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 ACAD10Q6JQN1 1059 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 C11orf63Q6NUN7 778 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 ZBTB8OSQ8IWT0 167 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 TMEM192Q8IY95 271 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NPLOC4Q8TAT6 608 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 INO80BQ9C086 356 aaPredicted RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 MTMR12Q9C0I1 747 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 GDF3Q9NR23 364 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NR2E1Q9Y466 385 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 PCDHB2Q9Y5E7 798 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 RAD51CO43502 376 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 HOXC6P09630 235 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CHRM1P11229 460 aaPredicted RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 NOP14P78316 857 aaKnown RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 AMHR2Q16671 573 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 ZNF484Q5JVG2 852 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 MARCH8Q5T0T0 291 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 MPZL3Q6UWV2 235 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 DPP9Q86TI2 863 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 WDR49Q8IV35 697 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 EFCAB13Q8IY85 973 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 TMEM130Q8N3G9 435 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 MSL3Q8N5Y2 521 aaKnown RBP7.02□□□□□ -1.29
USP47-201ENST00000305481 UBR7Q8N806 425 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 C2orf69Q8N8R5 385 aa7.02□□□□□ -1.29
USP47-201ENST00000305481 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms