RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CDT1Q9H211 546 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 GNEQ9Y223 722 aaKnown RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 PCDHB4Q9Y5E5 795 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 PTPRJQ12913 1337 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 NRCAMQ92823 1304 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 CNTNAP2Q9UHC6 1331 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 SMIM10L2AP0DMW4 78 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 SMIM10L2BP0DMW5 78 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 CYP2C9P11712 490 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 TBXAS1P24557 533 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 NOP14P78316 857 aaKnown RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 MFSD14CQ5VZR4 134 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 ZNF710Q8N1W2 664 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 EPS8L1Q8TE68 723 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 PPP1R13LQ8WUF5 828 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 RABGGTAQ92696 567 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 CPSF3Q9UKF6 684 aaKnown RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 BTNL10A8MVZ5 291 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 FAM155AB1AL88 458 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 KRT19P08727 400 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 CXCR5P32302 372 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 BEX3Q00994 111 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 KIZQ2M2Z5 673 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 DAAM2Q86T65 1068 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 SYCE1Q8N0S2 351 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 GPR161Q8N6U8 529 aaKnown RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 SLC30A5Q8TAD4 765 aa15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 GCOM2Q9BZD3 368 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-201ENST00000303383 ANKRD62A6NC57 917 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 FTLP02792 175 aaPredicted RBP15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 TMEM253P0C7T8 217 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 AKR1A1P14550 325 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 CYP11B1P15538 503 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 CCDC70Q6NSX1 233 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 APBB1IPQ7Z5R6 666 aaPredicted RBP15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 NOP9Q86U38 636 aaKnown RBP15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 ZNF410Q86VK4 478 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 CEP120Q8N960 986 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 KATNAL1Q9BW62 490 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 SPC25Q9HBM1 224 aa15.58■□□□□ 0.09
SHCBP1-201ENST00000303383 ZNF185O15231 689 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 IL18RAPO95256 599 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 C6orf222P0C671 652 aaPredicted RBP15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 PSEN2P49810 448 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 CDC42EP1Q00587 391 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 CUL2Q13617 745 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 RFFLQ8WZ73 363 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 ACP6Q9NPH0 428 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 CTTNBP2NLQ9P2B4 639 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 VNN1O95497 513 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 F2P00734 622 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 CXCL8P10145 99 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 TM4SF4P48230 202 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 RPS6KA1Q15418 735 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 CATSPER4Q7RTX7 472 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 PEX26Q7Z412 305 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 KIAA0319LQ8IZA0 1049 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 USP6NLQ92738 828 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 RPGRIP1Q96KN7 1286 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 ZIC5Q96T25 663 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 ARID3AQ99856 593 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 GJD2Q9UKL4 321 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 PCDHGC5Q9Y5F6 944 aa15.58■□□□□ 0.08
SHCBP1-201ENST00000303383 SIP14410 1827 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 TBC1D8O95759 1140 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 MMEP08473 750 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 CLTAP09496 248 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 MCF2P10911 925 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 FSCN1Q16658 493 aaKnown RBP15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 FAM187BQ17R55 369 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 TMEM270Q6UE05 265 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 TAS2R14Q9NYV8 317 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 RTN2O75298 545 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 RHOXF2BP0C7M4 288 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 IQCF3P0C7M6 154 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 STAG3L1P0CL83 205 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 PROZP22891 400 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 CDR2Q01850 454 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 PTPROQ16827 1216 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 LINC01465Q8N7H1 131 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 RHOXF2Q9BQY4 288 aa15.57■□□□□ 0.08
SHCBP1-201ENST00000303383 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 ARF4P18085 180 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 KYAT1Q16773 422 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PALB2Q86YC2 1186 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 C7orf31Q8N865 590 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 SLC35G2Q8TBE7 412 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 THAP2Q9H0W7 228 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PTPRHQ9HD43 1115 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PACSIN2Q9UNF0 486 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 ATP8B3O60423 1300 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 GNAT1P11488 350 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PRLRP16471 622 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms