RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GPC5P78333 572 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 HLTFQ14527 1009 aaKnown RBP eCLIP23.51■■□□□ 1.35
TPM4-201ENST00000300933 ERO1BQ86YB8 467 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 PSPC1Q8WXF1 523 aaKnown RBP23.51■■□□□ 1.35
TPM4-201ENST00000300933 MSTO1Q9BUK6 570 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 CENPHQ9H3R5 247 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 SOCS7O14512 581 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 EXTL3O43909 919 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 TNFSF9P41273 254 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 GLE1Q53GS7 698 aaKnown RBP23.5■■□□□ 1.35
TPM4-201ENST00000300933 CAVIN3Q969G5 261 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 FGD4Q96M96 766 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 ZNF408Q9H9D4 720 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 RBAKQ9NYW8 714 aaPredicted RBP23.5■■□□□ 1.35
TPM4-201ENST00000300933 RTN2O75298 545 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 CFHP08603 1231 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 EDNRBP24530 442 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 RTP1P59025 263 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 ANKRD13AQ8IZ07 590 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 OR5B17Q8NGF7 314 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 TCHPQ9BT92 498 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 ERVK-5Q9HDB9 667 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 PAPPA2Q9BXP8 1791 aa23.5■■□□□ 1.35
TPM4-201ENST00000300933 TTI1O43156 1089 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 HLA-DRAP01903 254 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 PDE6CP51160 858 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 ZNF473Q8WTR7 871 aaKnown RBP23.49■■□□□ 1.35
TPM4-201ENST00000300933 CPA5Q8WXQ8 436 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 TRIM7Q9C029 511 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 EPN3Q9H201 632 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 OTOFQ9HC10 1997 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 IGKV6D-21A0A0A0MT36 114 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 COMTP21964 271 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 IFT88Q13099 833 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 MKRN4PQ13434 485 aaPredicted RBP23.49■■□□□ 1.35
TPM4-201ENST00000300933 SEPT1Q8WYJ6 367 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 ZNF653Q96CK0 615 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 PPP1R16BQ96T49 567 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 UMODL1Q5DID0 1318 aa23.49■■□□□ 1.35
TPM4-201ENST00000300933 FSBPO95073 299 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 VNN1O95497 513 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 NR1D1P20393 614 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 HPDP32754 393 aaPredicted RBP23.48■■□□□ 1.35
TPM4-201ENST00000300933 PIK3CAP42336 1068 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 NAMPTP43490 491 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 PASD1Q8IV76 773 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 DDX1Q92499 740 aaKnown RBP23.48■■□□□ 1.35
TPM4-201ENST00000300933 NUP85Q9BW27 656 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 NOP56O00567 594 aaKnown RBP23.48■■□□□ 1.35
TPM4-201ENST00000300933 CSDE1O75534 798 aaKnown RBP23.48■■□□□ 1.35
TPM4-201ENST00000300933 DAB2IPQ5VWQ8 1189 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 TMEM130Q8N3G9 435 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 SYT17Q9BSW7 474 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 NIFKQ9BYG3 293 aaKnown RBP23.48■■□□□ 1.35
TPM4-201ENST00000300933 NEUROG2Q9H2A3 272 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 DPH5Q9H2P9 285 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 NRBP2Q9NSY0 501 aa23.48■■□□□ 1.35
TPM4-201ENST00000300933 PMM2O15305 246 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 OSTNP61366 133 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 NEDD9Q14511 834 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 TARBP2Q15633 366 aaKnown RBP23.47■■□□□ 1.35
TPM4-201ENST00000300933 KDM7AQ6ZMT4 941 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 FMNL3Q8IVF7 1028 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 IQCKQ8N0W5 287 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 TRIM51Q9BSJ1 452 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 AZI2Q9H6S1 392 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 APOBEC3GQ9HC16 384 aaKnown RBP23.47■■□□□ 1.35
TPM4-201ENST00000300933 C1orf112Q9NSG2 853 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 CDR2Q01850 454 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 METTL7BQ6UX53 244 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 RASGEF1CQ8N431 466 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 CCT8L2Q96SF2 557 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 PPANQ9NQ55 473 aaKnown RBP23.47■■□□□ 1.35
TPM4-201ENST00000300933 AGTPBP1Q9UPW5 1226 aa23.47■■□□□ 1.35
TPM4-201ENST00000300933 DICER1Q9UPY3 1922 aaKnown RBP23.47■■□□□ 1.35
TPM4-201ENST00000300933 E7EVH7 732 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 C4BPAP04003 597 aaKnown RBP23.46■■□□□ 1.35
TPM4-201ENST00000300933 USP37Q86T82 979 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 RHOT2Q8IXI1 618 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 TRPC6Q9Y210 931 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 SPDYE5A6NIY4 337 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 CES2O00748 559 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 DAPK3O43293 454 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 GJA5P36382 358 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 MOGSQ13724 837 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 PTGISQ16647 500 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 ZACNQ401N2 412 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 C15orf39Q6ZRI6 1047 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 MAATS1Q7Z4T9 603 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 RNF149Q8NC42 400 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 RUBCNQ92622 972 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 A6NNZ2 444 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 NF2P35240 595 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 FLT3P36888 993 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 KCTD2Q14681 263 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 PSMD6Q15008 389 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 TUBB8Q3ZCM7 444 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 MICALCLQ6ZW33 695 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 ZNF564Q8TBZ8 553 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms