RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FANCGO15287 622 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 NCOA4Q13772 614 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 HIC1Q14526 733 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 ARHGEF6Q15052 776 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 TAF2Q6P1X5 1199 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 ALKBH5Q6P6C2 394 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 RAET1EQ8TD07 263 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 KAT5Q92993 513 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 TATDN2Q93075 761 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 MACROD2A1Z1Q3 448 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 FKTNO75072 461 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 VNN1O95497 513 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 TNNC2P02585 160 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 UQCRHP07919 91 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 STAG3L1P0CL83 205 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 DARSP14868 501 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 TNFAIP3P21580 790 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 C1QTNF8P60827 252 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 CXCL17Q6UXB2 119 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 CEP120Q8N960 986 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 ANKRD36BP1Q96IX9 119 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 OSMRQ99650 979 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 NAPGQ99747 312 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 DUSP10Q9Y6W6 482 aa16.92■□□□□ 0.3
HERPUD1-201ENST00000300302 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 TACC1O75410 805 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 CLSTN1O94985 981 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 CXCL8P10145 99 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 EIF4BP23588 611 aaKnown RBP16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 TBXAS1P24557 533 aaPredicted RBP16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 CCND3P30281 292 aaPredicted RBP16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 TFAMQ00059 246 aaKnown RBP16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 TRIM58Q8NG06 486 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 ERO1AQ96HE7 468 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 FAM84AQ96KN4 292 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
HERPUD1-201ENST00000300302 DDX3XO00571 662 aaKnown RBP eCLIP16.9■□□□□ 0.33e-18■■■■□ 26.5
HERPUD1-201ENST00000300302 AXLP30530 894 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 GTF2F1P35269 517 aaKnown RBP eCLIP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 ZNF200P98182 395 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 TRPC3Q13507 836 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 TUBB2AQ13885 445 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 NBPF20Q3BBV1 942 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 GLYCTKQ8IVS8 523 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 PXYLP1Q8TE99 480 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 SYT11Q9BT88 431 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 TUBB2BQ9BVA1 445 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 ASB7Q9H672 318 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 GTF2IRD1Q9UHL9 959 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 INTUQ9ULD6 942 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 RPLP2P05387 115 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 CST5P28325 142 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 CRYBB1P53674 252 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 NOP14P78316 857 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 PCSK9Q8NBP7 692 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 NOX5Q96PH1 765 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 SEPT11Q9NVA2 429 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 NENFQ9UMX5 172 aa16.9■□□□□ 0.3
HERPUD1-201ENST00000300302 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 M0QZ92 97 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 CYP26A1O43174 497 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 KRT5P13647 590 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 FGFR4P22455 802 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 PDE6CP51160 858 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 NAP1L1P55209 391 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 CUL2Q13617 745 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 SNX17Q15036 470 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 MAP3K21Q5TCX8 1036 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 RSPH3Q86UC2 560 aa16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 LNX1Q8TBB1 728 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 CCDC94Q9BW85 323 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-201ENST00000300302 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 SLU7O95391 586 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 ASS1P00966 412 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 ASGR1P07306 291 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 GRM5P41594 1212 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 BPIFB4P59827 614 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 KCNA10Q16322 511 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 CD302Q8IX05 232 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 EFCAB13Q8IY85 973 aa16.88■□□□□ 0.29
HERPUD1-201ENST00000300302 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms