RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 BCCIPQ9P287 314 aaKnown RBP eCLIP10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SCINQ9Y6U3 715 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KIAA1217Q5T5P2 1943 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GOLGA8IPA6NC78 632 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GOLGA8JA6NMD2 632 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GRIN3BO60391 1043 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATP9AO75110 1047 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 UNGP13051 313 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MAPK4P31152 587 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 BACE1P56817 501 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 STRN3Q13033 797 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MTMR2Q13614 643 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PTK6Q13882 451 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NBPF9Q3BBW0 867 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TNFAIP8L3Q5GJ75 292 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TTC27Q6P3X3 843 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SLC39A4Q6P5W5 647 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NSMFQ6X4W1 530 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCDC121Q6ZUS5 278 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 REPS2Q8NFH8 660 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCHCR1Q8TD31 782 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KAT5Q92993 513 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TATDN2Q93075 761 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SAAL1Q96ER3 474 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CHMP6Q96FZ7 201 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 XPO6Q96QU8 1125 aaKnown RBP10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CYP26B1Q9NR63 512 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 HOMER2Q9NSB8 354 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GABBR1Q9UBS5 961 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SLC9A2Q9UBY0 812 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RARAP10276 462 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CETN2P41208 172 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NSFP46459 744 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MARCKSL1P49006 195 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LMNB2Q03252 620 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 BAATQ14032 418 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PPP1R7Q15435 360 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZACNQ401N2 412 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SGO2Q562F6 1265 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MCOLN2Q8IZK6 566 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RAPGEF5Q92565 580 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 BICD1Q96G01 975 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SNF8Q96H20 258 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NSRP1Q9H0G5 558 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PPANQ9NQ55 473 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 COL11A1P12107 1806 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SPATA31C2B4DYI2 1134 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 FZD9O00144 591 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ASAP2O43150 1006 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RIPK2O43353 540 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TCEA3O75764 348 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CYP1A1P04798 512 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GHRP10912 638 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KRT5P13647 590 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LIG4P49917 911 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GRM1Q13255 1194 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LACTB2Q53H82 288 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ABHD15Q6UXT9 468 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SERPINB12Q96P63 405 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 FNBP1Q96RU3 617 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ANAPC7Q9UJX3 599 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CNTN6Q9UQ52 1028 aa10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MYH9P35579 1960 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SORBS3O60504 671 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CAND2O75155 1236 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PROSCO94903 275 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SUPT20HL2P0C7V6 817 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DSG3P32926 999 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ICAM3P32942 547 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RFC5P40937 340 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NAMPTP43490 491 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LIG3P49916 1009 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SEC24CP53992 1094 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PRKCEQ02156 737 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ACTN3Q08043 901 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF568Q3ZCX4 644 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SUPT20HL1Q3ZLR7 823 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RELL1Q8IUW5 271 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ANKS4BQ8N8V4 417 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 BSNDQ8WZ55 320 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CABS1Q96KC9 395 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 POLR3FQ9H1D9 316 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PICK1Q9NRD5 415 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 THAP12O43422 761 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF862O60290 1169 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SLC29A2Q14542 456 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ITIH4Q14624 930 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 EMC2Q15006 297 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms