RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 CDR2LQ86X02 465 aaPredicted RBP16.75■□□□□ 0.27
LSM6-201ENST00000296581 THNSL1Q8IYQ7 743 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 TATDN2Q93075 761 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 FAM49AQ9H0Q0 323 aaPredicted RBP16.75■□□□□ 0.27
LSM6-201ENST00000296581 RNF186Q9NXI6 227 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 CTAGE9A4FU28 777 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 CACNB2Q08289 660 aaPredicted RBP16.75■□□□□ 0.27
LSM6-201ENST00000296581 TRIM32Q13049 653 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 CEP120Q8N960 986 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
LSM6-201ENST00000296581 PPP1R13LQ8WUF5 828 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
LSM6-201ENST00000296581 C17orf102A2RUQ5 167 aa16.74■□□□□ 0.27
LSM6-201ENST00000296581 B4GALT4O60513 344 aa16.74■□□□□ 0.27
LSM6-201ENST00000296581 KIZQ2M2Z5 673 aa16.74■□□□□ 0.27
LSM6-201ENST00000296581 WDR44Q5JSH3 913 aa16.74■□□□□ 0.27
LSM6-201ENST00000296581 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
LSM6-201ENST00000296581 NAPGQ99747 312 aaPredicted RBP16.74■□□□□ 0.27
LSM6-201ENST00000296581 MTG1Q9BT17 334 aaPredicted RBP16.74■□□□□ 0.27
LSM6-201ENST00000296581 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
LSM6-201ENST00000296581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.74■□□□□ 0.27
LSM6-201ENST00000296581 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
LSM6-201ENST00000296581 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 TREHO43280 583 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 ERLIN2O94905 339 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 MAP2K2P36507 400 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.27
LSM6-201ENST00000296581 KYAT1Q16773 422 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 GNASQ5JWF2 1037 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
LSM6-201ENST00000296581 CPB2Q96IY4 423 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 BTNL10A8MVZ5 291 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 IL18RAPO95256 599 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 CLTAP09496 248 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 RARBP10826 455 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 GNAT1P11488 350 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 RPF1Q9H9Y2 349 aaKnown RBP16.73■□□□□ 0.27
LSM6-201ENST00000296581 SPC25Q9HBM1 224 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 SRRDQ9UH36 339 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 MRFAP1Q9Y605 127 aa16.73■□□□□ 0.27
LSM6-201ENST00000296581 ADAMTS4O75173 837 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TRPA1O75762 1119 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 SLU7O95391 586 aaKnown RBP16.72■□□□□ 0.27
LSM6-201ENST00000296581 STAG3L1P0CL83 205 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TMEM62Q0P6H9 643 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TMEM192Q8IY95 271 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 C7orf31Q8N865 590 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 PACSIN1Q9BY11 444 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 INTUQ9ULD6 942 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TACC1O75410 805 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 PGK1P00558 417 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 DARSP14868 501 aaKnown RBP16.72■□□□□ 0.27
LSM6-201ENST00000296581 HOXD10P28358 340 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 OSTNP61366 133 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 ZNF200P98182 395 aaPredicted RBP16.72■□□□□ 0.27
LSM6-201ENST00000296581 NCOA4Q13772 614 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TUBB2AQ13885 445 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 EFCAB13Q8IY85 973 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 DNAJB3Q8WWF6 145 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 TUBB2BQ9BVA1 445 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 MTMR12Q9C0I1 747 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 CDHR5Q9HBB8 845 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
LSM6-201ENST00000296581 NOCTQ9UK39 431 aaKnown RBP16.72■□□□□ 0.27
LSM6-201ENST00000296581 CAPN6Q9Y6Q1 641 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 MYH10P35580 1976 aa16.72■□□□□ 0.27
LSM6-201ENST00000296581 CLGNO14967 610 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 MEFVO15553 781 aaPredicted RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 PHACTR2O75167 634 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 CXCL8P10145 99 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 TNFAIP3P21580 790 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 NME8Q8N427 588 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 CD99L2Q8TCZ2 262 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 EPS8L1Q8TE68 723 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 U2AF1L4Q8WU68 220 aaKnown RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 FAM53CQ9NYF3 392 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 CYP26A1O43174 497 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 MOCS3O95396 460 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 SGPL1O95470 568 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 ASS1P00966 412 aaKnown RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 ELNP15502 786 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 CCND3P30281 292 aaPredicted RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 HOXA11P31270 313 aaPredicted RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 USP8P40818 1118 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 AMPD2Q01433 879 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms