RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PFKMP08237 780 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 WDR5P61964 334 aaKnown RBP16.41■□□□□ 0.22
CCDC140-201ENST00000295226 TFAMQ00059 246 aaKnown RBP16.41■□□□□ 0.22
CCDC140-201ENST00000295226 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 HACE1Q8IYU2 909 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 GSTCDQ8NEC7 633 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 TMC2Q8TDI7 906 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 C18orf25Q96B23 403 aaPredicted RBP16.41■□□□□ 0.22
CCDC140-201ENST00000295226 PGBD4Q96DM1 585 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 KIF12Q96FN5 646 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 IFNKQ9P0W0 207 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
CCDC140-201ENST00000295226 SMIM28A0A1B0GU29 152 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 PTGESO14684 152 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 OFD1O75665 1012 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 EOMESO95936 686 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 POMCP01189 267 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 ACTN1P12814 892 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 SCNN1GP51170 649 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 MAN2A1Q16706 1144 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CBWD6Q4V339 395 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CBWD3Q5JTY5 395 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CBWD5Q5RIA9 395 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 SARM1Q6SZW1 724 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CRIPAKQ8N1N5 446 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 ELMO3Q96BJ8 720 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CGRRF1Q99675 332 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCDC140-201ENST00000295226 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 GIT1Q9Y2X7 761 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 LRRC10BA6NIK2 292 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 H0YGN5 161 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 TEX33O43247 280 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 LRRN2O75325 713 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 IL18RAPO95256 599 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
CCDC140-201ENST00000295226 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 NDST4Q9H3R1 872 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
CCDC140-201ENST00000295226 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
CCDC140-201ENST00000295226 CDC25BP30305 580 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 UBASH3AP57075 661 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 XKR4Q5GH76 650 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 C9orf50Q5SZB4 431 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 NPAS4Q8IUM7 802 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 TMEM117Q9H0C3 514 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 ASB7Q9H672 318 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 ELAC1Q9H777 363 aaKnown RBP16.39■□□□□ 0.21
CCDC140-201ENST00000295226 GOLGA2P5Q9HBQ8 144 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 INTS13Q9NVM9 706 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
CCDC140-201ENST00000295226 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
CCDC140-201ENST00000295226 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 AMHP03971 560 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 KCNJ6P48051 423 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 FMO5P49326 533 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 CLDN10P78369 228 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 PAN2Q504Q3 1202 aaKnown RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 TDRD10Q5VZ19 366 aaKnown RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 GLB1LQ6UWU2 654 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 TOP1MTQ969P6 601 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 RPS6KC1Q96S38 1066 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 XPO4Q9C0E2 1151 aaKnown RBP16.38■□□□□ 0.21
CCDC140-201ENST00000295226 HCSTQ9UBK5 93 aa16.38■□□□□ 0.21
CCDC140-201ENST00000295226 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
CCDC140-201ENST00000295226 KCNE1P15382 129 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
CCDC140-201ENST00000295226 POU5F1Q01860 360 aaKnown RBP16.37■□□□□ 0.21
CCDC140-201ENST00000295226 UBXN1Q04323 297 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 SURF1Q15526 300 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 ZBTB6Q15916 424 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 WDR49Q8IV35 697 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 CD302Q8IX05 232 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 HERVK_113Q902F9 699 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 CASD1Q96PB1 797 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
CCDC140-201ENST00000295226 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 UBN1Q9NPG3 1134 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 RALGAPA2Q2PPJ7 1873 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 TBKBP1A7MCY6 615 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 LGALS16A8MUM7 142 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 B4GALT3O60512 393 aa16.37■□□□□ 0.21
CCDC140-201ENST00000295226 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
CCDC140-201ENST00000295226 THP07101 528 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms