RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RWDD2BP57060 319 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 PPP1R7Q15435 360 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 CLEC16AQ2KHT3 1053 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 CCDC50Q8IVM0 306 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 HEMGNQ9BXL5 484 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 HOXC10Q9NYD6 342 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 PCDHB4Q9Y5E5 795 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 C19orf81C9J6K1 198 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 OATP04181 439 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 EDN1P05305 212 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 GARTP22102 1010 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 PTGIRP43119 386 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 HADHBP55084 474 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZDHHC18Q9NUE0 388 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 MTUS1Q9ULD2 1270 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 TTLL13PA6NNM8 815 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 FZD9O00144 591 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 O00370 1275 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 CHRNA3P32297 505 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 DHX34Q14147 1143 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZFYVE27Q5T4F4 411 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 EIF1ADQ8N9N8 165 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 CD101Q93033 1021 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 RLFQ13129 1914 aa16.9■□□□□ 0.3
NCKIPSD-201ENST00000294129 BHMG1C9JSJ3 638 aaPredicted RBP16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 CAND2O75155 1236 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 NSFP46459 744 aaKnown RBP16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 HIRAP54198 1017 aaPredicted RBP16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 PMS2P54278 862 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 OAZ1P54368 228 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZNF394Q53GI3 561 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZDHHC24Q6UX98 284 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 GADL1Q6ZQY3 521 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 TRIM50Q86XT4 487 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 OR5B17Q8NGF7 314 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 PCDHA3Q9Y5H8 950 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 FAM169AQ9Y6X4 670 aa16.89■□□□□ 0.3
NCKIPSD-201ENST00000294129 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 PMM2O15305 246 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 MDM1Q8TC05 714 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 KLHL11Q9NVR0 708 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 COILP38432 576 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 SLC29A2Q14542 456 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 SGO2Q562F6 1265 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 GRHL1Q9NZI5 618 aa16.89■□□□□ 0.29
NCKIPSD-201ENST00000294129 NFASCO94856 1347 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 VNN1O95497 513 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CD58P19256 250 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 GTF2H1P32780 548 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 MAGEA9P43362 315 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 LIG3P49916 1009 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 VGLL4Q14135 290 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 PPP2R5EQ16537 467 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 PTGISQ16647 500 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 ZACNQ401N2 412 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CDR2LQ86X02 465 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 MCOLN2Q8IZK6 566 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CCDC114Q96M63 670 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 ASIC3Q9UHC3 531 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 ARID2Q68CP9 1835 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 THAP12O43422 761 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 PPFIA2O75334 1257 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CTNNA2P26232 953 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 TNFSF9P41273 254 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 GCNT1Q02742 428 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 ZBTB10Q96DT7 871 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 HERPUD2Q9BSE4 406 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 EPN3Q9H201 632 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 PORCNQ9H237 461 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 CHST7Q9NS84 486 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms