RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 MAFBQ9Y5Q3 323 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-201ENST00000291842 UNGP13051 313 aaPredicted RBP19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 SCP2P22307 547 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 RWDD2BP57060 319 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 PSMD6Q15008 389 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 CLUL1Q15846 466 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 ZACNQ401N2 412 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 C1orf131Q8NDD1 294 aaKnown RBP19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 TXLNGYQ9BZA5 131 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 FBXO40Q9UH90 709 aa19.64■□□□□ 0.74
SHKBP1-201ENST00000291842 SSC5DA1L4H1 1573 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 EBAG9O00559 213 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 VNN1O95497 513 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 C4BPAP04003 597 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 TMOD1P28289 359 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 RUFY4Q6ZNE9 571 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 MCOLN2Q8IZK6 566 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 UHMK1Q8TAS1 419 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 MORC4Q8TE76 937 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 C1orf54Q8WWF1 131 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 CYFIP2Q96F07 1278 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 FAM107BQ9H098 131 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 PORCNQ9H237 461 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 RBAKQ9NYW8 714 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 PCYOX1Q9UHG3 505 aa19.64■□□□□ 0.73
SHKBP1-201ENST00000291842 LCTP09848 1927 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 STAM2O75886 525 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 HSPA6P17066 643 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 DRP2Q13474 957 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 SNX1Q13596 522 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 SIX1Q15475 284 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 SLC7A3Q8WY07 619 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 MSTO1Q9BUK6 570 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 EPB41L4BQ9H329 900 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 APOBEC3GQ9HC16 384 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 MYPNQ86TC9 1320 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 TTLL13PA6NNM8 815 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 ERLIN2O94905 339 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 COILP38432 576 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 PMS2P54278 862 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 MAGOHP61326 146 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 EMC10Q5UCC4 262 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 ENOSF1Q7L5Y1 443 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 DHX33Q9H6R0 707 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 PPANQ9NQ55 473 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 BTBD7Q9P203 1132 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 MTUS1Q9ULD2 1270 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 UMODL1Q5DID0 1318 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 MROH7Q68CQ1 1323 aa19.63■□□□□ 0.73
SHKBP1-201ENST00000291842 H0YCG3 227 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 UBA1P22314 1058 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 PTGISQ16647 500 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 TMEM270Q6UE05 265 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 OR5B17Q8NGF7 314 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 MTFR1LQ9H019 292 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 PCDHB2Q9Y5E7 798 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 SMIM23A6NLE4 172 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 A6NNZ2 444 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 ZC3H11AO75152 810 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 ATG7O95352 703 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 ALDH5A1P51649 535 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 TUBB8Q3ZCM7 444 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 PCYT2Q99447 389 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 EPN3Q9H201 632 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 KIAA1586Q9HCI6 787 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 GPRC5DQ9NZD1 345 aa19.62■□□□□ 0.73
SHKBP1-201ENST00000291842 GSTTP1A0A1W2PQM5 241 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 USP2O75604 605 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 GGPS1O95749 300 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 ARL2P36404 184 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 NAMPTP43490 491 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 NSFP46459 744 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 CLDN10P78369 228 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 VGLL4Q14135 290 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 RNF25Q96BH1 459 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 SEMA4AQ9H3S1 761 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 PCDHB4Q9Y5E5 795 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 POLR2AP24928 1970 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 TLDC2A0PJX2 215 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 E7EVH7 732 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 O00370 1275 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 CAND2O75155 1236 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 DRG2P55039 364 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 CORO7P57737 925 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 ATG4AQ8WYN0 398 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 C11orf70Q9BRQ4 267 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 HERPUD2Q9BSE4 406 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 STYXL1Q9Y6J8 313 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 FAM169AQ9Y6X4 670 aa19.61■□□□□ 0.73
SHKBP1-201ENST00000291842 PODXLO00592 558 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 GJB6O95452 261 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 ACO1P21399 889 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 FGFR4P22455 802 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 CUL2Q13617 745 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 SLC29A2Q14542 456 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 ZBTB33Q86T24 672 aa19.6■□□□□ 0.73
SHKBP1-201ENST00000291842 NCAPG2Q86XI2 1143 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms