RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 LRRC26Q2I0M4 334 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 C15orf39Q6ZRI6 1047 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 PARD3BQ8TEW8 1205 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 CCDC94Q9BW85 323 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 EDEM3Q9BZQ6 932 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 TAB2Q9NYJ8 693 aa9.11□□□□□ -0.95
PTPDC1-201ENST00000288976 LRRIQ3A6PVS8 624 aaPredicted RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 EFCAB14O75071 495 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 STAG3L1P0CL83 205 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 CBWD2Q8IUF1 395 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 SEPT8Q92599 483 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 SAAL1Q96ER3 474 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PAWRQ96IZ0 340 aaKnown RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PLCB1Q9NQ66 1216 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 TOPORSQ9NS56 1045 aaPredicted RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 INTS13Q9NVM9 706 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PADI3Q9ULW8 664 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 COQ4Q9Y3A0 265 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBBXA8MT70 800 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PQBP1O60828 265 aaKnown RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 NPTXRO95502 500 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PAX3P23760 479 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 FMO5P49326 533 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 YARSP54577 528 aaKnown RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 FMNL3Q8IVF7 1028 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PGBD4Q96DM1 585 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 ACAP3Q96P50 834 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PPP1R16BQ96T49 567 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 IKZF4Q9H2S9 585 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 HIPK3Q9H422 1215 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 EOMESO95936 686 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 TIMP1P01033 207 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 CTSHP09668 335 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 ACTN2P35609 894 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 KCNH2Q12809 1159 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 C1orf220Q5T0J3 134 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF397Q8NF99 534 aaPredicted RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PPP1R13LQ8WUF5 828 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 RNF34Q969K3 372 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBTB45Q96K62 511 aaPredicted RBP9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 KCNE1P15382 129 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 LMAN1P49257 510 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM189BP81408 668 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 MYL7Q01449 175 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 UBXN1Q04323 297 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 TLE2Q04725 743 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 MBTPS1Q14703 1052 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 SPA17Q15506 151 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 APOL6Q9BWW8 343 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 SIK3Q9Y2K2 1263 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 IPPQ9Y573 584 aa9.1□□□□□ -0.95
PTPDC1-201ENST00000288976 PLCB3Q01970 1234 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 TBX2Q13207 712 aaPredicted RBP9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 EPC2Q52LR7 807 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 SPECC1LQ69YQ0 1117 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 KRT39Q6A163 491 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 GBP6Q6ZN66 633 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 SMG8Q8ND04 991 aaKnown RBP9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 CACTINQ8WUQ7 758 aaKnown RBP9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 FNBP1Q96RU3 617 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 GVINP1Q7Z2Y8 2422 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 TTC26A0AVF1 554 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 BAIAP3O94812 1187 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 CD52P31358 61 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 IFIH1Q9BYX4 1025 aaKnown RBP9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 WNT8AQ9H1J5 351 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 ITGA11Q9UKX5 1188 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 SSX2IPQ9Y2D8 614 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 MICAL3Q7RTP6 2002 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 XPOTO43592 962 aaKnown RBP9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 GSDMDP57764 484 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 ABI1Q8IZP0 508 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 ANKRD36BP1Q96IX9 119 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM105AQ9NUU6 356 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 TMEM39AQ9NV64 488 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 ATP11BQ9Y2G3 1177 aa9.09□□□□□ -0.95
PTPDC1-201ENST00000288976 NBNO60934 754 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 GHRP10912 638 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 DCAF17Q5H9S7 520 aaPredicted RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 PLEKHO2Q8TD55 490 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ZNF668Q96K58 619 aaPredicted RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 NUCKS1Q9H1E3 243 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 VPS16Q9H269 839 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 PCDHB2Q9Y5E7 798 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 GOLGA8IPA6NC78 632 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 GOLGA8JA6NMD2 632 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 C4BPAP04003 597 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 KRT19P08727 400 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 FGFR4P22455 802 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ATICP31939 592 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TNFSF9P41273 254 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms