RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MAIP1Q8WWC4 291 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 TMEM8AQ9HCN3 771 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 PFASO15067 1338 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
SMAD6-201ENST00000288840 STAM2O75886 525 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 KCNT1Q5JUK3 1230 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 TRIM68Q6AZZ1 485 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 ZBED8Q8IZ13 594 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 PIK3R5Q8WYR1 880 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 KREMEN1Q96MU8 473 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
SMAD6-201ENST00000288840 SYNJ2BP-COX16A0A087WUM0 186 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 CDR2Q01850 454 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 KAT2BQ92831 832 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 MCEEQ96PE7 176 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 TGS1Q96RS0 853 aaKnown RBP16.91■□□□□ 0.3
SMAD6-201ENST00000288840 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 COX16Q9P0S2 106 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 PSMC4P43686 418 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 ARSEP51690 589 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 DCAF12L1Q5VU92 463 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 MCPH1Q8NEM0 835 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 RBM15Q96T37 977 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMAD6-201ENST00000288840 OSBPL8Q9BZF1 889 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 DEFB129Q9H1M3 183 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 MRPL47Q9HD33 250 aaKnown RBP16.91■□□□□ 0.3
SMAD6-201ENST00000288840 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 FBXO40Q9UH90 709 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 DCTN4Q9UJW0 460 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 KIAA0391O15091 583 aaKnown RBP16.91■□□□□ 0.3
SMAD6-201ENST00000288840 VCAM1P19320 739 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 CCDC6Q16204 474 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 AGBL2Q5U5Z8 902 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 MOV10L1Q9BXT6 1211 aaKnown RBP16.91■□□□□ 0.3
SMAD6-201ENST00000288840 KCND2Q9NZV8 630 aa16.91■□□□□ 0.3
SMAD6-201ENST00000288840 ZC3H4Q9UPT8 1303 aaKnown RBP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 JAM2P57087 298 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 ERICH1Q86X53 443 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 RFX6Q8HWS3 928 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 MICALL2Q8IY33 904 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 SNF8Q96H20 258 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 ZSCAN5DPP0CG00 497 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 ANXA13P27216 316 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 IRX4P78413 519 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 PPP2R5DQ14738 602 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 PGM5Q15124 567 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 CROCCP2Q86T23 111 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 RBBP8NLQ8NC74 664 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 H0Y3Z8 333 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
SMAD6-201ENST00000288840 MXRA7P84157 204 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 BMT2Q1RMZ1 405 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 TTC27Q6P3X3 843 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 RHPN2Q8IUC4 686 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 SMC6Q96SB8 1091 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 LRRC4CQ9HCJ2 640 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 GINM1Q9NU53 330 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 RIPK3Q9Y572 518 aa16.9■□□□□ 0.3
SMAD6-201ENST00000288840 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 SFNP31947 248 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 CASC4Q6P4E1 433 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 LRRC8CQ8TDW0 803 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ZNF302Q9NR11 478 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 H7C0C1 242 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 GRAP2O75791 330 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 CREB1P16220 341 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 PSMA2P25787 234 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ATP5OP48047 213 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ACTR2P61160 394 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 FMO1Q01740 532 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ZC3H18Q86VM9 953 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 RHOT1Q8IXI2 618 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 RFX1P22670 979 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 RXRBP28702 533 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ALDH3A1P30838 453 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 NLRP11P59045 1033 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 PDIA2Q13087 525 aaKnown RBP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 ATL2Q8NHH9 583 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMAD6-201ENST00000288840 APOL6Q9BWW8 343 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.29
SMAD6-201ENST00000288840 TRAPPC3O43617 180 aa16.88■□□□□ 0.29
SMAD6-201ENST00000288840 SHOX2O60902 331 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms