RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 DCLK3Q9C098 648 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 ST6GALNAC4Q9H4F1 302 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 TMEM8AQ9HCN3 771 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 L3MBTL1Q9Y468 752 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 CETPP11597 493 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 COPS2P61201 443 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 ZNF268Q14587 947 aaPredicted RBP14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 C2CD6Q53TS8 623 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 MROH7Q68CQ1 1323 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 PLA2G4FQ68DD2 849 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 LLGL2Q6P1M3 1020 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 CRELD2Q6UXH1 353 aaPredicted RBP14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 KIF2BQ8N4N8 673 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 FAM84AQ96KN4 292 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 FAM118BQ9BPY3 351 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 ARL2BPQ9Y2Y0 163 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 COQ4Q9Y3A0 265 aa14.12□□□□□ -0.15
SLC28A1-201ENST00000286749 HGSO14964 777 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 GJB6O95452 261 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 SCP2P22307 547 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 STX2P32856 288 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 BNIP1Q12981 228 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 TKFCQ3LXA3 575 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 SYDE1Q6ZW31 735 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 SRRM1Q8IYB3 904 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 AGAP11Q8TF27 550 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 GRK7Q8WTQ7 553 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 C7orf43Q8WVR3 580 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 IWS1Q96ST2 819 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 TRAIPQ9BWF2 469 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 HEMGNQ9BXL5 484 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 QTRT2Q9H974 415 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 AGO4Q9HCK5 861 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 RAB20Q9NX57 234 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 ASTN2O75129 1339 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 CLRN2A0PK11 232 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 NFIBO00712 420 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 RRM1P23921 792 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 GBP2P32456 591 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 MAN1A1P33908 653 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 HSD17B4P51659 736 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 SNRPFP62306 86 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 AOC3Q16853 763 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 DHX37Q8IY37 1157 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 FITM2Q8N6M3 262 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 CPA5Q8WXQ8 436 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 PRCCQ92733 491 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 KLHL29Q96CT2 875 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 RMDN2Q96LZ7 410 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 CCPG1Q9ULG6 757 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 TBX20Q9UMR3 447 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 SORBS3O60504 671 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 KRT16P08779 473 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 CAV1Q03135 178 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 CGB2Q6NT52 195 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 MCOLN2Q8IZK6 566 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 GBP7Q8N8V2 638 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 GLIS2Q9BZE0 524 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-201ENST00000286749 A8MUI8 341 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 O00370 1275 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 RALAP11233 206 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 CNGA1P29973 690 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 CLNS1AP54105 237 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 XKR9Q5GH70 373 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 SV2AQ7L0J3 742 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 TMEM161BQ8NDZ6 487 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 ATL2Q8NHH9 583 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 C9orf72Q96LT7 481 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 EBF2Q9HAK2 575 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 PRKAG3Q9UGI9 489 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 NAALADL1Q9UQQ1 740 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 STK38LQ9Y2H1 464 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 ADGRA3Q8IWK6 1321 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 TCEA3O75764 348 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 UNGP13051 313 aaPredicted RBP14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 MRPS9P82933 396 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 MTMR1Q13613 665 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 PRUNE1Q86TP1 453 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 NLGN1Q8N2Q7 840 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 NSMCE1Q8WV22 266 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 RXFP1Q9HBX9 757 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 LGALS13Q9UHV8 139 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 SUFUQ9UMX1 484 aa14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.1□□□□□ -0.15
SLC28A1-201ENST00000286749 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-201ENST00000286749 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
SLC28A1-201ENST00000286749 WDR81Q562E7 1941 aa14.09□□□□□ -0.15
SLC28A1-201ENST00000286749 DENND3A2RUS2 1198 aa14.09□□□□□ -0.15
SLC28A1-201ENST00000286749 LYPLA2O95372 231 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms