RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 KIF2BQ8N4N8 673 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 RAB3IPQ96QF0 476 aaPredicted RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 PCDHB18PQ96TA0 734 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 LXNQ9BS40 222 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 ARID2Q68CP9 1835 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 E7ENQ6 273 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 H0YIN7 160 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 TP73O15350 636 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 PLS3P13797 630 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 ATP4AP20648 1035 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 PTK6Q13882 451 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 ARHGAP44Q17R89 818 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 MIGA2Q7L4E1 593 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 DHX37Q8IY37 1157 aaKnown RBP11.07□□□□□ -0.64
SKA1-201ENST00000285116 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 C7orf43Q8WVR3 580 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 ZNF577Q9BSK1 485 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 FGFR1OP2Q9NVK5 253 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
SKA1-201ENST00000285116 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 PYGMP11217 842 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 CCNB1P14635 433 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 MARCKSL1P49006 195 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 GPC3P51654 580 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 HSD17B4P51659 736 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 RASA3Q14644 834 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 SPATA21Q7Z572 469 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
SKA1-201ENST00000285116 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 SYCP3Q8IZU3 236 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 SAMD3Q8N6K7 520 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 EPS8L3Q8TE67 593 aaKnown RBP11.07□□□□□ -0.64
SKA1-201ENST00000285116 MXRA8Q9BRK3 442 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 FAM167BQ9BTA0 163 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 ARHGEF10LQ9HCE6 1279 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
SKA1-201ENST00000285116 LRRC42Q9Y546 428 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 ACTL7BQ9Y614 415 aa11.07□□□□□ -0.64
SKA1-201ENST00000285116 WDR81Q562E7 1941 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 A0A1W2PRG0 241 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 ECEL1O95672 775 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 MFAP3P55082 362 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 NCKAP1LP55160 1127 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 SNAP25P60880 206 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 FMO1Q01740 532 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 CDR2Q01850 454 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 THEMIS2Q5TEJ8 643 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 MFN1Q8IWA4 741 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 LARGE2Q8N3Y3 721 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 ZNF564Q8TBZ8 553 aaPredicted RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 K7ENM7 598 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 P4HBP07237 508 aaKnown RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 COPB2P35606 906 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 CTCFP49711 727 aaPredicted RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 DLG4P78352 724 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 JAG1P78504 1218 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 ENOSF1Q7L5Y1 443 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 KSR1Q8IVT5 923 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 LMNTD2Q8IXW0 634 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 FITM2Q8N6M3 262 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 ZNF526Q8TF50 670 aaPredicted RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 GRK7Q8WTQ7 553 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 DHX38Q92620 1227 aaKnown RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 TSC22D3Q99576 134 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 FOXP3Q9BZS1 431 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 HSPBP1Q9NZL4 362 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.06□□□□□ -0.64
SKA1-201ENST00000285116 PRKAG3Q9UGI9 489 aa11.06□□□□□ -0.64
SKA1-201ENST00000285116 SIP14410 1827 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 LRRD1A4D1F6 860 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 ZBTB39O15060 712 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 SORBS3O60504 671 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 LRRN2O75325 713 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 AP1G2O75843 785 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 GH2P01242 217 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PDE6BP35913 854 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 SLC1A1P43005 524 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 MXI1P50539 228 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PAPOLAP51003 745 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 RAB27AP51159 221 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 MRPS35P82673 323 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 CALCOCO2Q13137 446 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PRKG1Q13976 671 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 NUGGCQ68CJ6 796 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CEP128Q6ZU80 1094 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 EXOC3L1Q86VI1 746 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms